RiceWiki:Tissue-specific genes
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The page contains all the links of gene expressed in one of 9 tissues with transcriptome data which defined as tissue-specific (TS) gene. Click on link to a page not exists in RiceWiki will redirect you to a new edit page to create it.
Contents
Definition
Tissue-specific (TS) gene
House Keeping (HK) gene
In molecular biology, house keeping genes are typically constitutive genes that are required for the maintenance of basic cellular function, and are expressed in all cells of an organism under normal and patho-physiological conditions.[1][2][3]
Gene Expression Table
Leaves-20 days
Leaves-20 days
Post/Pre-emergence inflorescence
Post/Pre-emergence inflorescence
Anther
Anther
Pistil
Pistil
Seed-5/10 DAP
Seed-5/10 DAP
Embryo-25 DAP
Embryo-25 DAP
Endosperm-25 DAP
Endosperm-25 DAP
Gene Symbol | Expression level (RPKM) |
---|---|
Os01g07050 | 2.663 |
Os01g07030 | 0.244 |
Os01g29880 | 0.162 |
Os01g44240 | 3.847 |
Os01g50380 | 0.653 |
Os01g51460 | 1.233 |
Os01g66060 | 0.689 |
Os10g20670 | 0.129 |
Os10g30240 | 0.827 |
Os11g16920 | 0.3 |
Os11g17440 | 0.279 |
Os11g19850 | 1.032 |
Os11g23070 | 1.549 |
Os11g31390 | 0.412 |
Os11g38660 | 0.18 |
Os11g38970 | 5.647 |
Os12g19880 | 1.287 |
Os12g26010 | 0.766 |
Os12g35310 | 0.192 |
Os12g43150 | 2.045 |
Os02g16050 | 0.369 |
Os02g16220 | 0.11 |
Os02g29110 | 0.78 |
Os02g49040 | 0.597 |
Os03g05950 | 0.246 |
Os03g22130 | 0.706 |
Os03g26310 | 1.2 |
Os03g36270 | 3.077 |
Os04g17720 | 0.257 |
Os04g23190 | 0.199 |
Os04g47030 | 0.285 |
Os05g13800 | 0.172 |
Os05g21230 | 0.108 |
Os05g26250 | 4.853 |
Os05g41050 | 0.197 |
Os05g45680 | 0.316 |
Os06g13110 | 0.148 |
Os06g13750 | 0.394 |
Os06g24220 | 0.618 |
Os06g28790 | 1.493 |
Os06g33680 | 1.422 |
Os06g34670 | 0.391 |
Os06g45470 | 14.958 |
Os06g49720 | 0.273 |
Os07g07940 | 4.985 |
Os07g11370 | 0.852 |
Os07g26410 | 0.812 |
Os07g32090 | 0.734 |
Os07g47160 | 0.394 |
Os07g47800 | 0.534 |
Os08g07860 | 0.205 |
Os08g33580 | 0.3 |
Os09g01780 | 0.119 |
Shoots
Shoots
Seedling four-leaf stage
Seedling four-leaf stage
References
- ↑ Eisenberg E, and Levanon EY (July 2003). "Human housekeeping genes are compact". TRENDS in Genetics 19 (7): 362–365. doi:10.1016/S0168-9525(03)00140-9. PMID 12850439
- ↑ Kon Butte, AJ., et al.. (2001). "Further defining housekeeping, or "maintenance," genes focus on 'a compendium of gene expression in normal human tissues'.". Physiol.Genomics 7 (2): 95–96. PMID 11773595.
- ↑ Zhu, J., et al.. (2008). "On the nature of human housekeeping genes.". Trends in genetics 24 (10): 481–484. PMID 18786740.