Difference between revisions of "Os12g0127800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os12g0127800| Description = VQ domain containing protein| Version = NM_001072588.2 GI:297612589 GeneID:4351394| Length = 2288 bp| Definition = ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os12g0127800|
 
GeneName = Os12g0127800|

Revision as of 21:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0127800

Description

VQ domain containing protein

Version

NM_001072588.2 GI:297612589 GeneID:4351394

Length

2288 bp

Definition

Oryza sativa Japonica Group Os12g0127800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1331911..1334198

Sequence Coding Region

1331911..1332467,1334135..1334198

Expression

GEO Profiles:Os12g0127800

Genome Context

<gbrowseImage1> name=NC_008405:1331911..1334198 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1331911..1334198 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacatgctcgactcctccacctcctcctccccttggcttcctcccgacctcatgcctcccccgccgccgccgccgcccgccgccgccactctccaccaccacttccgcgccgccgccgccgcccccggccgccgccgcatcgccaagcgccgaccgcgcccgtcgcggcgccttcccaccacctacatcagcgccgacccggcaaacttccgccgcatggtgcaccaggtcaccggcgccgacgacctccctccccctcctccatcgctctctctacagcagacgacggagctcctcctcccggccgtgcacgccgctccagcgggctcgcccggcgctgcaggcgcgctgatgcttcccacgctcgacacctcggcgttcctgctcggccgccgcgcggagccggcggccgcggcgccgccgtgcgacgagtcggtggcgttggtaagaggaggagcgggtaattacggcagcaacaacaatagcattagcagcagtagcagcagcggcaactgtggtggtggcttccccaccttggactcatgggatctccttgtacgtgtgctgtgccatcaacaagtgtggctctggctagcacttagcagcccctggtcctga</cdnaseq>

Protein Sequence

<aaseq>MHMLDSSTSSSPWLPPDLMPPPPPPPPAAATLHHHFRAAAAAPG RRRIAKRRPRPSRRLPTTYISADPANFRRMVHQVTGADDLPPPPPSLSLQQTTELLLP AVHAAPAGSPGAAGALMLPTLDTSAFLLGRRAEPAAAAPPCDESVALVRGGAGNYGSN NNSISSSSSSGNCGGGFPTLDSWDLLVRVLCHQQVWLWLALSSPWS</aaseq>

Gene Sequence

<dnaseqindica>1..557#2225..2288#atgcacatgctcgactcctccacctcctcctccccttggcttcctcccgacctcatgcctcccccgccgccgccgccgcccgccgccgccactctccaccaccacttccgcgccgccgccgccgcccccggccgccgccgcatcgccaagcgccgaccgcgcccgtcgcggcgccttcccaccacctacatcagcgccgacccggcaaacttccgccgcatggtgcaccaggtcaccggcgccgacgacctccctccccctcctccatcgctctctctacagcagacgacggagctcctcctcccggccgtgcacgccgctccagcgggctcgcccggcgctgcaggcgcgctgatgcttcccacgctcgacacctcggcgttcctgctcggccgccgcgcggagccggcggccgcggcgccgccgtgcgacgagtcggtggcgttggtaagaggaggagcgggtaattacggcagcaacaacaatagcattagcagcagtagcagcagcggcaactgtggtggtggcttccccaccttggactcatgggatctcctgtaaatctagatcatatattgtcgatttctatcgatttctgattcttcatggctgtaattaactaagacgagatcaatgaacaggttggagcatctatctacctgattctctgttcgtgtccttgttaattttaagcttatgcctcgtatacacatggatgattttttttatcagtagtgttattttattgatcttacttaatttagagttccttttcttttaattattaagtgcgactgttaagttcgttttgatcttccttctgctgattccagcatcactgcatcagcctcaaggttcttaatttatgcaggatttttgttcttgtgaaactcttttgctttgtttgattagttggctcttgcttttctattgattttgagtctttgatgaatcctccttccaacagtagagctgctccagcaccatctcactgaacatgtggtttctgatcatttggtgaacaaaatgtaacaaaagatgtttttttatattagtacattttagagaggtgcttagtgcattaattcagctttagctatataattaattaattaatgcaccaaaccactgtggggggcagtagcatgtaaatgctgcttagacagtaagatacgttaggatgaagctaacagttcaattggagcagagcagggttgagaatcagtacttggaaaagattgattgtgagatacaacaataataatatcgtaatcatcgagccaggtttttttagaaaaataaagtattgcaatcatatatgcacacgcatactaagactgagtttagatccaaaagtttttcttcaaacttctaacttttttatcacatcaaaacttttttacatggctgtgtttagtttctgaaatcggggagaagtttggggaaagttggtagtttggaaaaaaaattttgagagtttatgtgtaggaaagttttggatgtgatggaaagttgaaagtttaggggaagtttggtgtgaactaaacaggaccatacataaattttcaacttttctgtcacatcgttcaaatttcaaccaaactttcaattttgacgtgaactaaacacaacttaaggttcagcggaagagtaactttttttaaaaaaacctaaggcggaactttgttccacttttatatttagaagaagataattgacccagtttataaaaaaaatcggacccgaaaactacacaactgtcacggttaattacagaaaaaccagctaaaaaccaccgttacacaactaactttacattgatctaccagtaacatcgttagtagaagtgatattaacataattgtactattaataattgatgtgatagtataaatagatataattcattgtaaagagtactataaaacaccgcagggcggaaaatgaaaggaaaaaaaaagaaacaaattgggtgtggaatcaacatgcatgcttaatgggaagaaaaaacaaatatgaagtgtatttgttaaacacatatgtaggcttgatctagagctgagctgtttggtgcttacaagtaactacctctagattgcccctaaaatacaatgcaaaaagggaagttgacaaggaaaggactatatcaacggagaggaagaatcagaggcacgagctgttgactactgagtctgcgtgtgatttctttctcctcaatttgcagtgtacgtgtgctgtgccatcaacaagtgtggctctggctagcacttagcagcccctggtcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0127800, RefSeq:Os12g0127800