Difference between revisions of "Os12g0126000"

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(Created page with "{{JaponicaGene| GeneName = Os12g0126000| Description = Multi antimicrobial extrusion protein MatE family protein| Version = NM_001072579.1 GI:115487119 GeneID:4351384| Len...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os12g0126000|
 
GeneName = Os12g0126000|

Revision as of 21:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0126000

Description

Multi antimicrobial extrusion protein MatE family protein

Version

NM_001072579.1 GI:115487119 GeneID:4351384

Length

4538 bp

Definition

Oryza sativa Japonica Group Os12g0126000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1250404..1254941

Sequence Coding Region

1250619..1250699,1250824..1250910,1250992..1251110,1251200..1251438,1251541..1251597
,1251896..1251982,1252125..1252666,1254617..1254928

Expression

GEO Profiles:Os12g0126000

Genome Context

<gbrowseImage1> name=NC_008405:1250404..1254941 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1250404..1254941 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaggccgggtgatgaacatgatgactgcaggacggctcctctgctggagcctaagcacgctcatggcgaaggcagcaacaacgacaagcaagaagaagatgaagaggaggttgggtcgttggggccgcgggtgttggtggagagcaagaagctgtgggtggtggcgggtccttccatctgcgcgcgcttctccaccttcggcgtcaccgtcatcagccaagccttcatcggccacatcggcgccaccgagctcgccggatacgctctcgtctccaccgtcctcatgcgcttcagcggcggcatcctcctaggcatggcaagtgcattggaaacattgtgtgggcaatcatatggcgccaagcaataccacatgttgggcatctatctacaacgttcatggatagttctcttgtgttgtgcagtcctcctcctcccgatatacctcttcaccactccactcctaatttttcttggccaggatcctaagatcgctgctatggccggcactatttcattgtggtatatccctgttatgatatccaatgttgggaacttcacgctccaaatgtacctacaagcacagagcaagaacatgattgtcacttatcttgccatgctcaatcttgggcttcaccttttcctatcatggcttttaacggtccagttccaccttggccttgctggggtcatgggctccatggtcattgcctactggattccagtatttggtcagcttgcttttgtcttctttggtggttgccctctaacatggacaggattctcatctgctgcttttactgaactcggtgctattgtcaagctttcactgtcttctggagtgatgctttgtgtggaattatggtacaacacaattttggttctcctcactggttatatgaagaatgcagagattgctcttgatgctctttcaatatgccttaatatcaatggttgggagatgatgatttctatagggtttttatctgcaacaggagtgcgggtggcaaatgaacttggagctggaagcgcaagaagggctaagtttgccattttcaatgtggtcaccacttctttctcgataggatttatgttgtttgtgctcttccttatctttcgtggaaggcttgcatacatatttactgaaagtaaggtagtagcagatgcagttgcggagctttctcccttgctagccttctccattttgttgaatagtattcaaccagtgctctcaggtgtcgctgttggatcaggttggcaaagtgtagttgcctatgttaatgttacatcatattacttgttcggtatccctattggtgtaatactaggctatgtgctaggatttcaagtaaagggcatttggattggtatgcttcttggtacgctagtccagactattgtgcttctatttatcactcttagaactgattgggaaaaacaggtagagattgctcgacagagattaaaccgctggtctatggatgagaatgggagacaacagaatccgggtgaaaatccatga</cdnaseq>

Protein Sequence

<aaseq>MERPGDEHDDCRTAPLLEPKHAHGEGSNNDKQEEDEEEVGSLGP RVLVESKKLWVVAGPSICARFSTFGVTVISQAFIGHIGATELAGYALVSTVLMRFSGG ILLGMASALETLCGQSYGAKQYHMLGIYLQRSWIVLLCCAVLLLPIYLFTTPLLIFLG QDPKIAAMAGTISLWYIPVMISNVGNFTLQMYLQAQSKNMIVTYLAMLNLGLHLFLSW LLTVQFHLGLAGVMGSMVIAYWIPVFGQLAFVFFGGCPLTWTGFSSAAFTELGAIVKL SLSSGVMLCVELWYNTILVLLTGYMKNAEIALDALSICLNINGWEMMISIGFLSATGV RVANELGAGSARRAKFAIFNVVTTSFSIGFMLFVLFLIFRGRLAYIFTESKVVADAVA ELSPLLAFSILLNSIQPVLSGVAVGSGWQSVVAYVNVTSYYLFGIPIGVILGYVLGFQ VKGIWIGMLLGTLVQTIVLLFITLRTDWEKQVEIARQRLNRWSMDENGRQQNPGENP</aaseq>

Gene Sequence

<dnaseqindica>4243..4323#4032..4118#3832..3950#3504..3742#3345..3401#2960..3046#2276..2817#14..325#tgtgctaggagaaatggagaggccgggtgatgaacatgatgactgcaggacggctcctctgctggagcctaagcacgctcatggcgaaggcagcaacaacgacaagcaagaagaagatgaagaggaggttgggtcgttggggccgcgggtgttggtggagagcaagaagctgtgggtggtggcgggtccttccatctgcgcgcgcttctccaccttcggcgtcaccgtcatcagccaagccttcatcggccacatcggcgccaccgagctcgccggatacgctctcgtctccaccgtcctcatgcgcttcagcggcggcatcctcgtaactatcctctctacccactacacttaatactatttaattacattttgtgtttaaactaatttaaactttgttttccaaattttccatcaaataactctcaaactttgctcgatttgatttttactgtatttttttcaagttgagatttatattttaaagtgtacataagtgcgagtctatgagaaatggatagtgtgggcatatagtcatgttagaaaaaaaaatctaacggtcaaagtaatggaaagtgtattgatggggaaaaaaatatcagacatgtcagagagatgaggcaacatttaatgtcacggaagggatccaaaatattcagaggcacataaaaaaattttcttttttaaaaaagacacaattcgtactgtaagaactaaattatgtgagacctatgtattttttgtttagaaaggggccatccgactaattcaaagcatcccttaatgtttgaagcggactcttagttcagccaccccctcttaatcattgcattgtctttatgcattagttatatacttgtgtgctcttcatgacttcaagtacaaataagctcgtaagatatctgtgttagctagctctggaacaatagcagactgccaagtttttatatatctagatattttttaaggaagcacagcagggagggaggccctacagtaatatattttattgatctttatctcctcatttagtccaaatattaaaaggaggagctcagtcttaaacagatatctcccggaagaaaaggtgggaggtttctgctcaagatgaagttatttcttatcttccaaatacactagacagaagttaagaatttatcgatgaagctgtaacccacatattggtttttagccttagccatcataatttaagttcccatcacggtattccaactaaatccaattgaagctcaacatgaagatgaaaatggacgtgtgaaacaaatgttgcattgtttcaatgaccccttgattacataacacacatactaggtcatactttggtggagcaattttttatgatctcgcatatatcgtgtgttcaatctattcataagaagtagcaatccaaaaactttaacttttgaagtgcacttactcttccataaccaaataaaatgtggaggctagacggatgtaattaaagatcagatagaagaatttctgaaaggcatagttcatgtttccccatatatacttccactgatcagcagtgtgatccaattccaagtttaggagtttgtttgactatcgagaaacctcatcatatgttttccgagatgatggcagattaaaattatcatccagatcagtagatacaaacactttgacagaggcctccttattagaagcaaaggaatatagccttagatatacattgcatggaggtggctagtgagaccacatatcttcctagaaggtgcaggcagttcccttatgtaagatacatctaggaattcctctaaagtggatgcttgttttacaaacatcattccaccagaaggactcttttgggatagttaaattaggcactaggtagacataatacttattctaaatcagttttacctaaggcaagtccttattgttataaaatttgttcaagtgtttcatgagcggtgcctaattttggattgtcaagttaatggcctcctcttctcctttaacttagtctgcaaaccttatgccaagcagccaggaattgtttttggagttgatcatatctgactatttccataagcagtgctttctccctatcaatgctctcaatcacagactttggtatcaaaagataccttactacaagtaatgatgacctctttatattttagacttttactaacaattaatttctagatgtaatcttatcttctatatatgcataaaaacacattataaattgctcaccttaaatgcacattgttgtaaactgcagctaggcatggcaagtgcattggaaacattgtgtgggcaatcatatggcgccaagcaataccacatgttgggcatctatctacaacgttcatggatagttctcttgtgttgtgcagtcctcctcctcccgatatacctcttcaccactccactcctaatttttcttggccaggatcctaagatcgctgctatggccggcactatttcattgtggtatatccctgttatgatatccaatgttgggaacttcacgctccaaatgtacctacaagcacagagcaagaacatgattgtcacttatcttgccatgctcaatcttgggcttcaccttttcctatcatggcttttaacggtccagttccaccttggccttgctggggtcatgggctccatggtcattgcctactggattccagtatttggtcagcttgcttttgtcttctttggtggttgccctctaacatggacaggattctcatctgctgcttttactgaactcggtgctattgtcaagctttcactgtcttctggagtgatgctttggtaagtaacaattgtgtttatgcatacatatgaaatttcagatatgcaatatgttagatgctaaatgtcgaccaacatattgtttagagctaattaattgctcatgtggtttattcttttttctttctcatttgcctttcagtgtggaattatggtacaacacaattttggttctcctcactggttatatgaagaatgcagagattgctcttgatgctctttcaatatggtaatatattcctctttcaattgttgcataatggtttagacaataaaaggtggggtatttgcaaatttgccactggttttttcaatattgcaaggatgccactcaaatgacagttctaatggcatttttgcaattttctagtggcagttttgcaataacgattcaaagtagtggtaaatttgcaattgccccataaaaggtagatcatgtttgtgggtacatcattgtattgttctttgttgttcctttagcagttgaaaaacttgcttattgagcattattgtttttccatatgtagccttaatatcaatggttgggagatgatgatttctatagggtttttatctgcaacagggtaacttagtgatcttacttgttacatgctaagtggttcatttgatcaatcaatcatgtcagataaatttcatttgacatacctatacatgtacatttctagagtgcgggtggcaaatgaacttggagctggaagcgcaagaagggctaagtttgccattttcaatgtggtcaccacttctttctcgataggatttatgttgtttgtgctcttccttatctttcgtggaaggcttgcatacatatttactgaaagtaaggtagtagcagatgcagttgcggagctttctcccttgctagccttctccattttgttgaatagtattcaaccagtgctctcaggtatggtattccatttaaaagaatagtatatatatcaatataatttgaaattgcacattggaattataatattttataatcatctgtaggtgtcgctgttggatcaggttggcaaagtgtagttgcctatgttaatgttacatcatattacttgttcggtatccctattggtgtaatactaggctatgtgctaggatttcaagtaaaggtgaggagccaattgataaaatttcattagtcaatttgggacttaaattgtgtttctcaattccatttgttgtttctatagggcatttggattggtatgcttcttggtacgctagtccagactattgtgcttctatttatcactcttagaactgattgggaaaaacaggtatgttaattgctcacaattttccttatctttttttttattaaatctcttaacccacatagcatgtgggtctctctagattttttttctcatttaatgatgtgtttcatgttcttttttctaggtagagattgctcgacagagattaaaccgctggtctatggatgagaatgggagacaacagaatccgggtgaaaatccatgatctaaaacttctgcacacttgtaatgaattatggtgatctatgaatcagcttgttctaatgggattgccctcagagtttaagatccttcaaggtgacatcatccttcaatgaacctataaatggcttggaatgatgtttttccccatgtgtcacaccatggaaaaaccgtgatgttattgaaggaaccttatatatatatggtcgtaaattatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0126000, RefSeq:Os12g0126000