Difference between revisions of "Os12g0125800"

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(Created page with "{{JaponicaGene| GeneName = Os12g0125800| Description = Multi antimicrobial extrusion protein MatE family protein| Version = NM_001189839.1 GI:297728808 GeneID:9270120| Len...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os12g0125800|
 
GeneName = Os12g0125800|

Revision as of 21:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0125800

Description

Multi antimicrobial extrusion protein MatE family protein

Version

NM_001189839.1 GI:297728808 GeneID:9270120

Length

1587 bp

Definition

Oryza sativa Japonica Group Os12g0125800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1234885..1236471

Sequence Coding Region

1234885..1234965,1235129..1235215,1235299..1235417,1235504..1235742,1235843..1235899
,1236057..1236143,1236311..1236471

Expression

GEO Profiles:Os12g0125800

Genome Context

<gbrowseImage1> name=NC_008405:1234885..1236471 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1234885..1236471 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatccatggtcatctccttttggatccctgtgtttggccagctcgcttttgtcttctttggtggttgccctctaacatggacagggttctcatcctctgcttttactgatcttggtgctattatgaagctttcgctatcgtctggagtgatgctttgtttagaattgtggtacaacaccatattggtgctcctcactagttatatgaagaatgcagaggttgctcttgatgctctttctatatgccttaatatcaacggttgggagatgatgatttctatcggatttttgtctgcaataggagtgcgggtggcaaatgaacttggagccgggagtgcaagaagggctaagtttgccattttcaatgtggtcaccacttctttcttgataggatttgtgttgtttgtgctcttccttttcttccgtggaagccttgcatacatatttactgaaagtaaggcggtagcagatgaagtcgctgatcttgctccccttctagctttctccattttgttgaatagtgttcaaccagtgctctcaggtgtcgctatcggatcgggttggcaaagtatagttgcctatgttaatgttacatcgtactacttgattggtatccctcttggtgcaatactaggctatgtgctaggatttcaagtaaagggtatttggatcggcatgcttcttggaacactagtccagactcttgtgcttctattcatcacacttaggaccgattggaaaaaacaggtagagattactcgagagagattaaacagatggtatatggatgagaacgggcgatcacagaattcaataggaaatgcatga</cdnaseq>

Protein Sequence

<aaseq>MGSMVISFWIPVFGQLAFVFFGGCPLTWTGFSSSAFTDLGAIMK LSLSSGVMLCLELWYNTILVLLTSYMKNAEVALDALSICLNINGWEMMISIGFLSAIG VRVANELGAGSARRAKFAIFNVVTTSFLIGFVLFVLFLFFRGSLAYIFTESKAVADEV ADLAPLLAFSILLNSVQPVLSGVAIGSGWQSIVAYVNVTSYYLIGIPLGAILGYVLGF QVKGIWIGMLLGTLVQTLVLLFITLRTDWKKQVEITRERLNRWYMDENGRSQNSIGNA </aaseq>

Gene Sequence

<dnaseqindica>1507..1587#1257..1343#1055..1173#730..968#573..629#329..415#1..161#atgggatccatggtcatctccttttggatccctgtgtttggccagctcgcttttgtcttctttggtggttgccctctaacatggacagggttctcatcctctgcttttactgatcttggtgctattatgaagctttcgctatcgtctggagtgatgctttggtaagtaacatggttatgtttatatgtatatatgaaatttttgacaaaaaaaattgatgatagcaaatagaaagttaatattttagatgctaattgttaatcaagttcttttatacaaataattagaagctcattaatttattctcatttttcttttaccttttcagtttagaattgtggtacaacaccatattggtgctcctcactagttatatgaagaatgcagaggttgctcttgatgctctttctatatggtaatatattccactccaatctgttgcatattagtttagaaaacaacaaccagatcatattgtatcatgtatatcattgtattgttttgtgtgtctcctctagtaattgaaaaggttgcttattgaacattgttgttttcacttgcaaaatttgtagccttaatatcaacggttgggagatgatgatttctatcggatttttgtctgcaatagggtaacttcacgatctcagctgtcactcactacgtggttcatctaactgatgcaacatgaaccataaatttgacatatacttaatgcatgtacatttttagagtgcgggtggcaaatgaacttggagccgggagtgcaagaagggctaagtttgccattttcaatgtggtcaccacttctttcttgataggatttgtgttgtttgtgctcttccttttcttccgtggaagccttgcatacatatttactgaaagtaaggcggtagcagatgaagtcgctgatcttgctccccttctagctttctccattttgttgaatagtgttcaaccagtgctctcaggtatgttactccatttgaaggacaagtatatatcaaagtaattcaaaatttaacaatgaaattactaattttctaattatatataggtgtcgctatcggatcgggttggcaaagtatagttgcctatgttaatgttacatcgtactacttgattggtatccctcttggtgcaatactaggctatgtgctaggatttcaagtaaaggtaaggaatttttgtatgatagaatttcactagttaatctggatttaagttgtgtccctcacttatgttcattctttatgtagggtatttggatcggcatgcttcttggaacactagtccagactcttgtgcttctattcatcacacttaggaccgattggaaaaaacaggttgccttttttttacctctgctcatattttctttcttatcctcttttctgattaaatatcttttttcaaataatataagggtctctctagaaaattcatgggtcattagaagagcatatttttctcatttaatgatgtgcttgatgtttaattttttttcaggtagagattactcgagagagattaaacagatggtatatggatgagaacgggcgatcacagaattcaataggaaatgcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0125800, RefSeq:Os12g0125800