Os12g0125500

From RiceWiki
Revision as of 21:31, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0125500

Description

Conserved hypothetical protein

Version

NM_001189838.1 GI:297728806 GeneID:4351382

Length

4021 bp

Definition

Oryza sativa Japonica Group Os12g0125500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1219954..1223974

Sequence Coding Region

1220348..1220428,1220585..1220671,1220757..1220885

Expression

GEO Profiles:Os12g0125500

Genome Context

<gbrowseImage1> name=NC_008405:1219954..1223974 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1219954..1223974 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctatttataggtgtcgctattggatctggttggcaaactatagttgcctatgttaatgttgcatcgtactacttgatcggtatccctattggggcaatactaggctatgctctaggatttgaagtaaagggcatttggattggcatgcttgttggaacactagtgcagactcttgtgcttttattcatcacacttaggactgattgggaaaaacaggtagagattgctcgagagagactaaatagatggtatacggatgataatggaagatcacaaaattcgagaggaaatccatga</cdnaseq>

Protein Sequence

<aaseq>LFIGVAIGSGWQTIVAYVNVASYYLIGIPIGAILGYALGFEVKG IWIGMLVGTLVQTLVLLFITLRTDWEKQVEIARERLNRWYTDDNGRSQNSRGNP</aaseq>

Gene Sequence

<dnaseqindica>3547..3627#3304..3390#3090..3218#gttaactccatcgatctccattgttgtgcactggagagctagctagctagcagagtagcaatggagaggacgacggaggatgatgagaggctgacggatcctctcctggagcctaagccggcgatcaacggcggcggcggaggcagcaacgaggaggaagaagaggttgggtcgctggggcggcgcctggtggaggagaacaagaagctgtgggtggtggcgggtccgtccatctgcgcgcgcgccacctccttcggcgccaccgtcgtcagccaggccttcatcgggcacatcggcgccaccgagctcgccgcgtatgccctcgtctccaccgtcctcatgcgcttgagcgtcggcatcctggtatgcctgatgaacgctgattattcttgcttatacggtagtacgtagtactacttaatttaattacaggtacaagttagttttcgttagtacgtgtaacagttcaactcgattttttttcacatgattagtctttctgcaactagcaacatttaaagacaaaatttgatacatgatattcacaaattatggtagtaattaacccttatttactaatacgcaccatcaaaacatggctttgtacgaatacaccttaaaacatcgatctactccctccatcccaaaaataacctaatcctacccaggattagttttttttcttttttgaccgaggaagtactcagctaagaaaagagaagacatacaaaatgtcgattattccctctagtcttcactcttgctagggttcaacagcgagagagcagagagactaggagatagggatacggtctggttttcacacctgagagggctgggctattctggtcgttttcaaatatgctaaaaatgataaaataatagatatgatattttctagcaaattaacacgttcttttaggtgtcctctggtcaagccacgttttgggagtatccctaataaaatcgctctttggatatcttgtagtaaattttgccaattttaaaaacataactttaataatgttggagtcatgacttaattatgtctatcgatactaatagcgtcactaagttttttttcttgaatttaatttgcacatcgattaattcgtacaaatcatgtatgtttggtttgcctttatactttcaaagtgtttttttccaccattgtactatagataagagttaggctcgatgtaaaaaaaaagacatgaaacgtaccgaaggaagaaaattatatgggatacttgcctcctcacatttttttttcttcttgagaaggggatcatcaaattattcaactttcaaaacactaattaatatttgaagcaggctcttcatctagtcatccaccccttaatcatggcattttcttcatgcaataactatatagtgtgctctttctttattcttcttggatcttccatatcctatcttcttcgtgctacctctgacaaccagcactgcaacaataacaaactctttatggtacaaaatatacaaataaaacataaacataccttactttaagttataaaaatgtttatcttttactaacaatcattttttgttacaaatcatcttgtacaaaatgcatacataaacaattcactattaacaattaattgatagttaaccatacatatacattattgtaactgcagataggcatggcaagcgcattggaaactttgtgtgggcaatcatatggtgctaagcaataccacatgttaggcatatatctacaacgctcatggatagttctcttctgttgtgcagtaatccttctcccaatctacctcttcaccaccccgctcctaattgcgcttggtcaggatcccgatatctctgttgtggctggcaccatctcactatggtacattcccatcatgttctcctacgtctggggcttaacaatccaaatgtatctacaatcacaaagcaagaacatgatcgttacctacctctccttgctcaactttggactccatctcttcctatcatggctcatggtggtcaagtttcaccttggccttgctggggtgatgggctccacggtcattgcctgttggatccctatatttggtcagctcgcatatgtcttttttggtggttgtcctcaaacatggacagggttctcgtcctctgcttttactgatctcggtgctattatcaagctttcgatatcatccggagtgatgctttggtaagtaactgttatgtttatgtatacatatgaaattctggataattttgatgatagcaaacaaaaggcaatatgttatatcaagctagtgttaaccaagttctttcctatagctaatttggtagctcattgatttgttcttgttgttcctttgcctttcagtgtagaattatggtacaacaccatattggtgctcctcactggttatatgaagaatgcagaggttgctcttgatgctctttctatatggtaatatgttaatatactattgttgcatagtagtttagaaaataatagccaaagcatgcatgttgtatcatgtacatcaatttattgttttgtgtctatcctttagtgcttgaagaacttgcttattgagcactattgttttcacttacaaaatttgtagccttaatatcaatggttgggagatgatgatttctattggatttttggctgcaactgggtaacttcatgatcttacttgttactcattaagtggttcatctgactattccattatgtcctataaatttgacttatacttaatacatatacatttttagagtgcgggtggcaaatgaacttggagctgggagtgcaagaagggctatgtttgccattttcaatgtggtcaccacttctttcttgataggatttgtgttttttgtgctcttccttttctttcgtggaagccttgcatacatatttactgaaagtcaagaggtagtagatgcagttgctgatcttgccccccttctagctttctccattttattaaatagtgttcaacctgtgctctcaggtatgttattttatttgacagatgaatatatcaaaataatttaaactttcactttgaaattacaacgttttctaactatttataggtgtcgctattggatctggttggcaaactatagttgcctatgttaatgttgcatcgtactacttgatcggtatccctattggggcaatactaggctatgctctaggatttgaagtaaaggtaaggtcctggttgccattgtaaatttcattaggaaatcttaggtctaagctgtgtttctcacttttattaattggctctatagggcatttggattggcatgcttgttggaacactagtgcagactcttgtgcttttattcatcacacttaggactgattgggaaaaacaggttggctttattatctttttgctcatattttttcttatcttgtatttaattaaatatctttttcacataatataagggtctatctagaaaaacatgtgggccattgaaagagcacacttttttagattttaatggtgtgctctattggttttttaggtagagattgctcgagagagactaaatagatggtatacggatgataatggaagatcacaaaattcgagaggaaatccatgatatgaaacttttgcacattcataatggaattgtaagagttcaagatccttcacgatcacatcatccatcatcaatgaaccaaatgttaatcacaaggcatggatgatgtttttttcccccgaagtgtcagaccaaggaagaaccacgatgttagtgaagtaaccttgaatataagccccttatcctttttttttagcatgatgcagcatatgcttgacctttatgtgttttatataatttttttttgtatttgttggaaagagcatgtatggctaagtgcttgtatgtgaattgattgtacccattgggttttgttttctacctttgagtaaatttatggattacactatcaaatgagagaaaatatccacacaaagttgtgggtcatttgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0125500, RefSeq:Os12g0125500