Os10g0544200

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os10g0544200

Description

Basic helix-loop-helix dimerisation region bHLH domain containing protein

Version

NM_001071735.1 GI:115483213 GeneID:4349271

Length

2350 bp

Definition

Oryza sativa Japonica Group Os10g0544200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21700005..21702354

Sequence Coding Region

21700313..21700405,21700830..21701000,21701350..21701556,21701663..21702334

Expression

GEO Profiles:Os10g0544200

Genome Context

<gbrowseImage1> name=NC_008403:21700005..21702354 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21700005..21702354 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctaatggacgacgacggctcgtcgtccctcctggaggagctcatggcgccgctccggagaggcacaccgacgacgacgccggaagatctgtggcttcaggcgtacccgatgatgatgagcccgatgtgcggcgacggcgtcatgctcggtgacctcctcgtcgggggcggcaacgcgaggaacacgcttgcctcgccgccgccgccgtcgttcccactgcctgtgcctctgacgacgacgactccttgtccgcctctgcacgaggtcagctttgagtttgattcaattgattgcttgggtgaagtgtgcaacccgtacaagagatcaggcggcgctgtccgtgccaccgccgccgctcaggtgatggtggccgccatggatccgagacgcgaagctgcgtcgtctgcggtggcggtggcggcggtggaggaggaggagagatgcaaggcgcgacgtggcgctggaggcggtggtgatagtggcgagctggcgcccatgttcgtgttcggcggcggcggcggcgcggcggcgagcgtccgcccaagaagctgcaggccgccgcaaccaggcgcgccgtccaagaacctgatggcggagcggcggcggcggaagcggctcaacgaccgcctctccatgctccgctccgtcgtgcctaggatcagcaagatggacaggacctcgattctcggcgacaccatcggctacgtgaaggagctgatggatcggatcaagaacctccaggtcgaggccgccaccggtgactcatcctcctcctccacggagaatctctccatgctgaagctgaacacgctcaagcctccgccgtcgtcgagctccggcgaagagacgccgcttatcagaaactcgacgaggttcgaggtggagaggagggagaacggaagcacgaggatcgagatggcatgcgcggcgatccccgagctgctgccgtcgacgctggccgcgctggaggcgctgggcgtggagatcgagcagtgcgtcatcagctgcttcgatgacttcgccatgcaggcctcctgcctacaggatgacaagaagagggagatgacaagagatactgaagagatcaagcagacattgttcaggagtgcaggctacggagatggctgtcttatataa</cdnaseq>

Protein Sequence

<aaseq>MELMDDDGSSSLLEELMAPLRRGTPTTTPEDLWLQAYPMMMSPM CGDGVMLGDLLVGGGNARNTLASPPPPSFPLPVPLTTTTPCPPLHEVSFEFDSIDCLG EVCNPYKRSGGAVRATAAAQVMVAAMDPRREAASSAVAVAAVEEEERCKARRGAGGGG DSGELAPMFVFGGGGGAAASVRPRSCRPPQPGAPSKNLMAERRRRKRLNDRLSMLRSV VPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAATGDSSSSSTENLSMLKLNTLKPP PSSSSGEETPLIRNSTRFEVERRENGSTRIEMACAAIPELLPSTLAALEALGVEIEQC VISCFDDFAMQASCLQDDKKREMTRDTEEIKQTLFRSAGYGDGCLI</aaseq>

Gene Sequence

<dnaseqindica>1950..2042#1355..1525#799..1005#21..692#gagctagggagctagctggcatggagctaatggacgacgacggctcgtcgtccctcctggaggagctcatggcgccgctccggagaggcacaccgacgacgacgccggaagatctgtggcttcaggcgtacccgatgatgatgagcccgatgtgcggcgacggcgtcatgctcggtgacctcctcgtcgggggcggcaacgcgaggaacacgcttgcctcgccgccgccgccgtcgttcccactgcctgtgcctctgacgacgacgactccttgtccgcctctgcacgaggtcagctttgagtttgattcaattgattgcttgggtgaagtgtgcaacccgtacaagagatcaggcggcgctgtccgtgccaccgccgccgctcaggtgatggtggccgccatggatccgagacgcgaagctgcgtcgtctgcggtggcggtggcggcggtggaggaggaggagagatgcaaggcgcgacgtggcgctggaggcggtggtgatagtggcgagctggcgcccatgttcgtgttcggcggcggcggcggcgcggcggcgagcgtccgcccaagaagctgcaggccgccgcaaccaggcgcgccgtccaagaacctgatggcggagcggcggcggcggaagcggctcaacgaccgcctctccatgctccgctccgtcgtgcctaggatcagcaaggtcacttactcacacgaatatgcatcaatcgcgctaactcctctctgattaatctccccgattatgattaatcagatcaaaacgttcgttacgcatcatcatgcagatggacaggacctcgattctcggcgacaccatcggctacgtgaaggagctgatggatcggatcaagaacctccaggtcgaggccgccaccggtgactcatcctcctcctccacggagaatctctccatgctgaagctgaacacgctcaagcctccgccgtcgtcgagctccggcgaagagacgccgcttatcagaaactcgacgagggtacgttatattactacatagtactctctctgttttaaaatgtttaacaccattgactttttagcacatgtttgaccgttcatcttattaaaaaaaatttatgaaatatataaaactatatgtgtactgaaagtatatttaacaatgaatcaaatgatatgaaaagaataaataattacttaaattttttaaataagacgaatggtcaaacacgtacttaaaaaaatcaacggtgtcaaacattttaaaatagagggagtacatacatatgcctcgccattagagctactacctagctagcggcattcatgatgatgatgatgcaatgcatgagatgagatgagtgcagttcgaggtggagaggagggagaacggaagcacgaggatcgagatggcatgcgcggcgatccccgagctgctgccgtcgacgctggccgcgctggaggcgctgggcgtggagatcgagcagtgcgtcatcagctgcttcgatgacttcgccatgcaggcctcctgcctacaggtgattatttagtagtacaccatatgcatccgattaattaaaccttatcaggtgatcgatttaaaatttaaagttaacttctccatccgtttcaaataattgtcattataaaccaaacattcatgtttttaactaccattgttttctagaattttctatagtttaacaacatgtgaattatatattatgaatgtatttcttatggagtaagtcttatgacactaagttatatcattttttagaaattgatagtaagaaatataaatatttggcttaggataaagttagaatgacaagtaacacagagaaagcacgtagcaattgggatttaggctttagtacttcaattgaacacttcaactacatattgtttgctaaattagattatgtgtggatgatgtatttatgaattcatgcgtgataggatgacaagaagagggagatgacaagagatactgaagagatcaagcagacattgttcaggagtgcaggctacggagatggctgtcttatataatggaccaacctcgatttgatccaaacaatgcaagcaaatatgagtagtaactacgttctaccagcactctcgattaggtcgtggtgccttattagttcatcttgcgtgcgatcaattctcactgcagtactgcacatctcactggaacagtaagaatatagtatagcatgatgagctgagcagtctgtggcataccatgtatttgatgatgcagttcgtgagatcattttctcattcctcttaattatatttatatatggatatcagcatgaacgctatatcttggatattatcaaattaatttctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0544200, RefSeq:Os10g0544200