Os08g0143400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
Gene Name |
Os08g0143400 |
---|---|
Description |
SWIRM domain containing protein |
Version |
NM_001067511.1 GI:115474758 GeneID:4344644 |
Length |
3740 bp |
Definition |
Oryza sativa Japonica Group Os08g0143400, complete gene. |
Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza. |
Chromosome | |
Location |
Chromosome 8:2384540..2388279 |
Sequence Coding Region |
2384917..2385671,2386693..2388229 |
Expression | |
Genome Context |
<gbrowseImage1> name=NC_008401:2384540..2388279 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
Gene Structure |
<gbrowseImage2> name=NC_008401:2384540..2388279 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
Coding Sequence |
<cdnaseq>atgtcgtcgtcgtcgcggcggccggcgaggagggcggcgttgacggcgaggtcgtcgtacgacgagtcgctggtggacgccgagctggagtcctacctcgggaacgccaggtcgcggcggatcagccggctgcgccgcctctccgccgacgagcggcagcgggagacggagacggaggcgctaatagcgctctcgctgggcttccccattgacgagctgctccccgccgagcggcccctcctgccggcccccgtcgccgccgcccccaacgactacatcgtcgtccgcaaccacatcctcgcctcgtggcgcgccgacccgcgggtgccgctcccgcgctcgcgcgtgcaggagaccgtcgccgccagctacgacaaccttgtcgccgtggcgcacgggttcctcgcccgggagggccacatcaacttcggcgtctccgccgcgttccccgcctccccaccacccgatgcgccgcagcgcctcgccgcatccgtgctcgtcgtcggcgccggtctcgccggcctcgccgccgcgcgccagctgctccgattcggcctccgcgtgctcgtcctcgagggccgcgcccgccccggcggccgcgtctacaccactcatctcggcggggaccaggccgccgttgagctcggcggcagcgtcatcaccggcatccacaccaacccgctcggcgtgctcgccaggcagctcgggattccactccacaaggtgcgagacagttgcccgctctaccaccacgacggccgcaccgtggacatgaagctggacaggagcatggatctggtgttcaacacgcttctagaacacgccacccggctgcgagagtatctcaagaaggcagccgaggggatctcgctaggggaaggtatagagaggctgagacgcttttacaaggtggcgaaaagcgtcgaggagagggaggttctggactggcatttggctaacctggaattctccaatgccggctgcctatcggagctctcgctcgcgcactgggaccaggatgaccagtatgagatggggggagaccattgcttcctagccggagggaatgcgaggctggtacacgcattgtgcgatggtgtgccggtgttgtatgagaagacggtgaagcggattgagcatggggaggatggggtgagcatcaccgtggaaggaggccaggttttcaaggctgacatggcactctgcactgctccacttggagtgctcaagagcaggagcatcatttttgaaccggagttgccagagaggaagcttgaagcaatccagaggttggggtttgggttgttgaacaaagtcgccatggtgtttccccatgtattttgggatgaggagattgacacatttgggtgtttgaataaggagaggagcaagcgtggcgagttctttctcttctacagctaccacactgtctctggtggtgcggtacttatcgcacttgttgcgggagaagctgctttggagtttgaaaaggttgatcctgctgtagcacttcatagggtccttggtattcttaaaggtatctatggccccaaaggtgttacagtgcctgatcccattcaatcatgttgcacaagatggggtagtgatcctctttgctcaggttcatactctcacatcagagttgggtcttctggcactgactatgatattctcgctgagagcgtcaatgaccggttattctttgctggagaagcaacaaatcgtgcataccctgcaacaatgcatggagctttattgagtggactaagggaagcttccaagattctccatgcttcggaaagtagattgaattctgattataagaagtatgccctgcagaaaagcatcagacttataaataatgtactggacgaccttttcatggagccagatctagaatgtggaagattctcgttcgtgttctcctatattacacctgaggaggaacaggctccgggattggctaggattacacttgagaagcctttgcttctgccttccaagaaacgcaaagtaaagggtaatcagaaggatcaggaccctgtggctgagaagatagaccaagaggtgttttatttatacgccaccgtctcgcaagagcaagcaactgaactattggaatgcgacaatgataaaagtaggatagcagttctatgcaaagatcttggtgttaaactaatgggttacgacagtacatacgatgtatgtagtcatctgatttctagcatctcgagagctcagaaagccaggaaaaggttgcagggaccgaagagcttgaaaaccggactttga</cdnaseq> |
Protein Sequence |
<aaseq>MSSSSRRPARRAALTARSSYDESLVDAELESYLGNARSRRISRL RRLSADERQRETETEALIALSLGFPIDELLPAERPLLPAPVAAAPNDYIVVRNHILAS WRADPRVPLPRSRVQETVAASYDNLVAVAHGFLAREGHINFGVSAAFPASPPPDAPQR LAASVLVVGAGLAGLAAARQLLRFGLRVLVLEGRARPGGRVYTTHLGGDQAAVELGGS VITGIHTNPLGVLARQLGIPLHKVRDSCPLYHHDGRTVDMKLDRSMDLVFNTLLEHAT RLREYLKKAAEGISLGEGIERLRRFYKVAKSVEEREVLDWHLANLEFSNAGCLSELSL AHWDQDDQYEMGGDHCFLAGGNARLVHALCDGVPVLYEKTVKRIEHGEDGVSITVEGG QVFKADMALCTAPLGVLKSRSIIFEPELPERKLEAIQRLGFGLLNKVAMVFPHVFWDE EIDTFGCLNKERSKRGEFFLFYSYHTVSGGAVLIALVAGEAALEFEKVDPAVALHRVL GILKGIYGPKGVTVPDPIQSCCTRWGSDPLCSGSYSHIRVGSSGTDYDILAESVNDRL FFAGEATNRAYPATMHGALLSGLREASKILHASESRLNSDYKKYALQKSIRLINNVLD DLFMEPDLECGRFSFVFSYITPEEEQAPGLARITLEKPLLLPSKKRKVKGNQKDQDPV AEKIDQEVFYLYATVSQEQATELLECDNDKSRIAVLCKDLGVKLMGYDSTYDVCSHLI SSISRAQKARKRLQGPKSLKTGL</aaseq> |
Gene Sequence |
<dnaseqindica>2609..3363#51..1587#tctcccctcgcctccgcgaagcgagagaaaccccaacctcgtcggcggcgatgtcgtcgtcgtcgcggcggccggcgaggagggcggcgttgacggcgaggtcgtcgtacgacgagtcgctggtggacgccgagctggagtcctacctcgggaacgccaggtcgcggcggatcagccggctgcgccgcctctccgccgacgagcggcagcgggagacggagacggaggcgctaatagcgctctcgctgggcttccccattgacgagctgctccccgccgagcggcccctcctgccggcccccgtcgccgccgcccccaacgactacatcgtcgtccgcaaccacatcctcgcctcgtggcgcgccgacccgcgggtgccgctcccgcgctcgcgcgtgcaggagaccgtcgccgccagctacgacaaccttgtcgccgtggcgcacgggttcctcgcccgggagggccacatcaacttcggcgtctccgccgcgttccccgcctccccaccacccgatgcgccgcagcgcctcgccgcatccgtgctcgtcgtcggcgccggtctcgccggcctcgccgccgcgcgccagctgctccgattcggcctccgcgtgctcgtcctcgagggccgcgcccgccccggcggccgcgtctacaccactcatctcggcggggaccaggccgccgttgagctcggcggcagcgtcatcaccggcatccacaccaacccgctcggcgtgctcgccaggcagctcgggattccactccacaaggtgcgagacagttgcccgctctaccaccacgacggccgcaccgtggacatgaagctggacaggagcatggatctggtgttcaacacgcttctagaacacgccacccggctgcgagagtatctcaagaaggcagccgaggggatctcgctaggggaaggtatagagaggctgagacgcttttacaaggtggcgaaaagcgtcgaggagagggaggttctggactggcatttggctaacctggaattctccaatgccggctgcctatcggagctctcgctcgcgcactgggaccaggatgaccagtatgagatggggggagaccattgcttcctagccggagggaatgcgaggctggtacacgcattgtgcgatggtgtgccggtgttgtatgagaagacggtgaagcggattgagcatggggaggatggggtgagcatcaccgtggaaggaggccaggttttcaaggctgacatggcactctgcactgctccacttggagtgctcaagagcaggagcatcatttttgaaccggagttgccagagaggaagcttgaagcaatccagaggttggggtttgggttgttgaacaaagtcgccatggtgtttccccatgtattttgggatgaggagattgacacatttgggtgtttgaataaggagaggagcaagcgtggcgagttctttctcttctacagctaccacactgtctctggtggtgcggtacttatcgcacttgttgcgggagaagctgctttggagtttgaaaaggttgatcctgctgtagcacttcatagggtccttggtattcttaaaggtaatcactgaacttacattccaatgtatctccataagaccatatttttttgaagtcttctaacaaggatggagtatggataagctttaagtatgaagtatgaactccttgcatattagaaaatgggggaatgaattatggaatggcataacaaggtgtcacataaattaaagaaaaagaacaatgtgtcatgtgttgatttaagattagatttaaattttgctatgacaatcggatttgttgtattaattcaagtagtccctgccatatgcattggatggttgcattagaaccatcaagggtatatttggaacctagtagagtcatgccaattccataatttattggagtgccatgttgtgttgatttaacttgaagtgtttatactaataatacaagtcaacagctctgtaaaaattaactctggattgtgtacactatctgtgtactgtcttaccatctacaatcctcaactaaccagtaaattttattatagagttattaatatggattggaacttggatggtgtttgaacactgaagtgctccttttagattaagagtatacagatggaaagaaggaatggaagggaaggaaattatataatgagatattttaaagattctgttacaaatgcgatgactagtacattttttcatttactttagagtttaaataaataaagaatatgctattcttttgcactatatcatactagtttgatgtgcagtgtgcaccaatgtgcatattggaagtctattggcatagtgggggcaaataaactgtgtgatgaatatggaatggtttgcaaataatgaaacatcagacagagtgaaacatgatttggagaatgtgaattatttccattattatcttgtaatatgaatttgtggtttgtaatggaaagggtaaaaaaacaactaggagaaatgtgcttagtttccaatatctcattatataatttttttttttggttttctatttcaataaccaatgaactcacttttgtgactttttccaggtatctatggccccaaaggtgttacagtgcctgatcccattcaatcatgttgcacaagatggggtagtgatcctctttgctcaggttcatactctcacatcagagttgggtcttctggcactgactatgatattctcgctgagagcgtcaatgaccggttattctttgctggagaagcaacaaatcgtgcataccctgcaacaatgcatggagctttattgagtggactaagggaagcttccaagattctccatgcttcggaaagtagattgaattctgattataagaagtatgccctgcagaaaagcatcagacttataaataatgtactggacgaccttttcatggagccagatctagaatgtggaagattctcgttcgtgttctcctatattacacctgaggaggaacaggctccgggattggctaggattacacttgagaagcctttgcttctgccttccaagaaacgcaaagtaaagggtaatcagaaggatcaggaccctgtggctgagaagatagaccaagaggtgttttatttatacgccaccgtctcgcaagagcaagcaactgaactattggaatgcgacaatgataaaagtaggatagcagttctatgcaaagatcttggtgttaaactaatgggttacgacagtacatacgatgtatgtagtcatctgatttctagcatctcgagagctcagaaagccaggaaaaggttgcagggaccgaagagcttgaaaaccggactttgatctgtaccgctactttattcttgtttgtagaaaagaaccccatattttctcttttggtttgggccaaaaactggctcatagattgttctctagtgtgcaaactttagacgtggggcaggaaaaccaagatcctccctgccatttgtaacatggcagtcatcagtcatctggcctccctcagtagattagaacttagatgcactgataaatttcaatgaatagtttggttgcaggtactattggattcttttagggaggctactattgttttcatcttcccccttttttttctagatgttgttcctatattggtatctggcagtttatgtgttgctgaaatggtggataagctcacttctggaccagtttgtttggct</dnaseqindica> |
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