Difference between revisions of "Os01g0110100"

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==Labs working on this gene==
 
==Labs working on this gene==
 
Please input related labs here.
 
Please input related labs here.
 +
1.National Institute of Agrobiological Sciences, Ibaraki 305-8602, Japan
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2.Division of Genome and Biodiversity Research, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan
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3.Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems, 1111 Yata, Mishima, Shizuoka 411-8540, Japan.
  
 
==References==
 
==References==

Revision as of 11:23, 1 June 2014

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Annotated Information

Function

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Expression

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Evolution

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Labs working on this gene

Please input related labs here. 1.National Institute of Agrobiological Sciences, Ibaraki 305-8602, Japan 2.Division of Genome and Biodiversity Research, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan 3.Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems, 1111 Yata, Mishima, Shizuoka 411-8540, Japan.

References

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Structured Information

Gene Name

Os01g0110100

Description

Conserved hypothetical protein

Version

NM_001185200.1 GI:297719534 GeneID:9270401

Length

5643 bp

Definition

Oryza sativa Japonica Group Os01g0110100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:536712..542354

Sequence Coding Region

540732..540959

Expression

GEO Profiles:Os01g0110100

Genome Context

<gbrowseImage1> name=NC_008394:536712..542354 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:536712..542354 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggtgcctatgctaagaagcctcgagtacgtcgcttgctactacatcagtggaagctacagaacacaggagtacggatactgcatcaacaccaagcatatcagagatttggcctatgcagtttccttcctgccctactactggagagccatgcaggtcaagccccttatgtccttcacaattctcaattttcaaccatgctctttcaataaaaaaagaaaatga</cdnaseq>

Protein Sequence

<aaseq>MQVPMLRSLEYVACYYISGSYRTQEYGYCINTKHIRDLAYAVSF LPYYWRAMQVKPLMSFTILNFQPCSFNKKRK</aaseq>

Gene Sequence

<dnaseqindica>4021..4248#agcacacaacaatataattaattagcagctgcatgcgtattgctcgttaattaagttgatcatatagaattaaccatggtgaagttctcgaagcaatttgaagggcagcttgtccctgagtggaagcatgcctttgtggactatagcttgctcaagaaagatcttaagaggatgcagcatgattattctccccaagggaccataattaccacctcaacacctcatgatcatcatcagcagcagcaatcagttgcggcgccatcaagttataatttgtctcactgcaggctcctgttgcacaagctcccggcggccttctttggctccaataatgctgatcatgctggagccatacaagtaattgacagtaaatccttgtgctaccatttttatcagttttgcaattaagccatagccatgcatgtgtactgaatcttttgcatgtactgtgtgtgcacatatatatataaatggaaaataggtgcgccggagagtgggcaggggggaggtttacgagacggaggtgacgccggagatggagacgacggcggcgacggcggcgagggagttcttcgcgaggctggacgcgcagctgaacaaggtgaaccacttctacaaggccaaggaggaggagttcctccacagaggtcactccctccggaagcagatggacatactcctcgacctcaagtcgcggtcgtcgtcgtctctctccggccaccaccgcgccgccgccggcgacgacccctccatttcttcttcttccgccacctccggcgccggtgagctacctctctctttctctctctcctgtagtgaccatggttagtgggaagctggtggtgagagaggatggagatgagctagcaggtattgtcatgcacgtaggatcgcattcgcagcaactagcttagcttagcttaattacccaaccccatttcatttcatttcatttcatggtacgtatggtattggtacgtgcgtgagcagcttgcccgggaataatggaatatcctcccctgatcaattgtgtggatgtctttaatgacttgcgtttttgtctgcatttggcacgaccatcatatcaacctcaacatcctactttacttagtgtcgcatcctgtccctcctgataatacctggtatagtagtatttatatattcttctttttctaaagagtacttttgcataggtatatatgccgcgtacagttaacaccttgacaattacaagcatatataattgtgtaggtcgagtttaaaaaactatatatactttgaccaaactatcataaaactatatttaaataccaaattaatatatcacaaaaccatgcatggatttaatatgaagtatcataaaactacatatcgacttagtaatgaagttatcataaaactacatattttagagtttatatttctagcaatattattctgatggagttataaacatagtctaattttggtgataagcttaatgctaaacccttgtggcctttccatggtgtggtttagatatgtacttcctctttgttacatatcataatgttacatatcataagtcattttgattttttaagtcaaatttttttaagtttgatcccatagaaaaatataacaatattttcaactcaaaacaaagaaactatctaaatatgttcaatgttatatgtaatgaaactaatatgatgctataagtgttgctctatttttttttaaacttggtcaaatttaaaaagccaaaacaaattataatatgaaacagaatgagtactaactagtatgcgattagacattttctagtattcaaatttattgtattatgaaatatctaatatcatactaggtagtaacattttgaaaatgtgaagtagtttttctatactaaggtcaaagtatttgtatttttgcaaaagttactttatatatggagattcttttttatgtcaatgctatcccctcattaattcgagaagaataacatgcagatgacatccatacatgaatatatgccaaattatgacagctatctaaaataatggcatttattccctcatgcaaaaaaatctacagttctatatagttcactcaatattaattactgattttttttataaaaaaaactcaaaacagaggatgagtccacgaggtacgtgacgtcagcaacagacacggacgagagccaacacgaaaccgcggtgatgagagaccctgaagagctttcggctgagcagggtctagaagattctggaagcttgtcaaggcagagcctagggaggacagtgagcagctgccagaggaagaacctgaagatcaacatccccctgacgacgccatgcaggacaatctctgcactcaccgacctcctccgggacgatctcgtcagccagcccaagaacaaatgcgactctgacgccggcatcacgttcacgaccatcaacaagacgaagctccggcacgccgagaagatgatcaagggcgccttcatcgagctctacaaaggtcttggatacctcacaacctaccggtaatttaatcaactgctaatctgtcatcctctaggaaatccatgtgtgttcagttcagattcagaagttcagaactgtttgtgtgatgtgaaatgcatgcaggaacctgaacatgatggcgttcgtgaagatcctgaagaagttcgagaaggttagcgggaagcaggtgctgtccgtatacctcagggcggtggagagctcctacttcaacagctccggcgaggctctgaagctgatggacgaggtggaggacgtgttcgtcaggcacttcgccgccggcaacaggcgcaaggccatgaagtacctcaagcccacgcaacggaaggagtcacacactgtcacattcttcatcggtaaacccaaaacaagaatctgcatgcagtttccactttgcaatgacaatctttgtaccactctgaatgtatgtatatgcagggctcatgacgggatgcttcgtggcgctgttcttgggctactgcatcatggcgcacatcgccggaatgtacacgcagcggcgcgactccatctacatggagaccgtctaccctgttttcaggtacacgcatgtagactctgcattttctgaaattctgcgttgatcgaatactgtatctgaattctgacatgaatggcaatggataattttgcagcatgttcagcctaatgttcctgcacctgttcatgtacgggtgcaacatggtggcgtggaggaaggcccggatcaactacagcttcatcttcgagttcgcggccggaagagagctcaagtaccgggacgtcttcctcgtctgcaccgcatccatggccgtcatcgtcggcgtcatgttcgcgcacctctccctcgccgtcaggggattccacgcccaggccatccccggattcttgctcctggtgaactcttctttcttgctccctcctgtcagactgtcgtcagtgtcacactgtcactgtcaacaaggaaccaaattaagaacatgcttttcttgctcattggatggacacgttgatcttgagttgttctcctgcaactggatcgtttcagaatgagaataatcatagtagtaatggaatctgttggtgctgcatgtctgaatgtaggggttcctgctgctgctgttctgcccattcaacatggtgtatcgctccactcggtttcagttcctcaggatactgaggaacatcgttttctcaccactctacaaggtaccacagtacatcttttctttttttttcttttgctaatctcttcatggagaataatgttgccaaattagtccaaattactacatatgttcttatatatcatgatggtttctgaatgtctgcaggttgtaatggtagacttcttcatggcagatcagctctgcagccaggtactactgaatatgctctacttaaaccactcaatccatgtcctgcattcaactgaaacctgaaaaaacaatggggataaacagataattaactttctgaaagaacaaaataaaaaatgcaggtgcctatgctaagaagcctcgagtacgtcgcttgctactacatcagtggaagctacagaacacaggagtacggatactgcatcaacaccaagcatatcagagatttggcctatgcagtttccttcctgccctactactggagagccatgcaggtcaagccccttatgtccttcacaattctcaattttcaaccatgctctttcaataaaaaaagaaaatgaaccatgcaaattttatgttccatatatcagcagtttggaatacacatttattgataaaatggaataaacacacacacaaaacaaaatgcactctgttcagctgaaaagaaaaactctctgaacttcctgaatatttctgaactttctgaaaatgtttgtgtatgttaatcagtgtgcaagacggtggttcgatgagagcgacacgggccacctggtaaacctgggcaagtacgtctcggcgatgctcgccgccggcgccaaagtggcctacgagaaggacaggagccttggatcactctcactcctcgtcatcgtctccagctctgcaacaatgtatcagctctactgggactttgtcaaggactggggcttgctccagcccaactccaagaatccatggctgaggaatgacctcatccttaagagcaagtccatatactacttgtcaatggtatgcatgttcgtcagtctatccccattcagacaggtgtataagcacagccaaaacgagttcatttgcagtagttcagtacaagctgcacgctcaaacacacactgtccaatcgacaaacccgactctcaatctctcaatcacagatcatcgataatgctcaaccgatatccaacctactatttaaaccacactatagtattgaaatggaaacgcaatttgatctgaatttgcaatgaatctgttccggggagaagtgaaccaaacactcaagtgttgtctgaacttttgcagggtctgaaccttgtgctaaggcttgcatggctacaaaccgtgatccatccaaactttgggagtttggactccagggtcacttcattctttctagctgctctcgaggtgatccggagagggcattggaatttctataggtaactgaagtttcagagttctgaacaaccacttatcctaaaaaataaaacagaaaaagcagtagcaggatttaggcaagaaaaatgagatcctgagacctgtggcatatgcttctttttttttttatatcaggctggagaacgagcatctgaacaatgcaggcaaattcagggcggtaaaaacagttccgctgccttttcacgaagctgacgaggaggactgatacgtgctacacaactgctgaatgatcatctgaccaagtgaccatgactagatctaatacttgtttcctcaccactcaattttttttttcaaaagagaaagtctcaagaatggtggagagttcagttcagtgactaaaatactttcactgaaataccttcagggttcagccttcagggaatggcaattgtatgcaactgaagacagtgatccgttcctagatgcattaacatgtataaaatacgcatcgcagtatcgcaaatgacatgaggttacttttgtttggcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0110100, RefSeq:Os01g0110100