Os01g0109700

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Annotated Information

Function

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Expression

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Evolution

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References

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Structured Information

Gene Name

Os01g0109700

Description

Similar to Paired amphipathic helix protein SIN3

Version

NM_001048330.1 GI:115434073 GeneID:4326133

Length

8559 bp

Definition

Oryza sativa Japonica Group Os01g0109700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:512890..521448

Sequence Coding Region

513578..513730,513809..513920,514000..514163,514369..514521,514598..514736
,514823..514923,514995..515666,515953..516038,516112..516777
,516874..517128,517231..517358,518645..518799,518880..519100
,519186..519215,519324..519399,519511..519644,519871..520153
,520692..520850,520940..521038,521142..521310,521423..521448

Expression

GEO Profiles:Os01g0109700

Genome Context

<gbrowseImage1> name=NC_008394:512890..521448 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:512890..521448 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtcatgcgcgatttcaagagtgagaggattgataccaacggagtcattattcgtgtcaagacactcttcaacgggtaccctgagctcatccttggcttcaataccttcttgcccaagggttatgcaatcaagctgcaggaggagaagaagcctgttgatttcgtggaagccatcaatttcgtaaacaagattaagaatcggttccagcatgatgagcatgtctataaggcattcttagacatcctcaacatgtaccgcaaggacaataaatccatccaagatgtttaccatgaggttgctgtgttgtttgcagaccacaaagatttactcgaagagttccaacacttcttgcctgatacctccgtgcctccacaagctgtggccccttcaaggcctggtattaggcgggatgacaggacctctctggtgcctcctgctagtaggaatgaaaagagggataaggctcatccacatgctgaccgtgagagtgttgatcgtcctgatctggaccatgttatccagcgaagacgccctaaggataggcatgattatgatagaggcgataaggatggtgaacttgacagcaaagatcttgatataggacttaagcgcaaaccttttccaaggaagatggaggaccctaccagtgctgatgcacaccatggagggcccctggaaaatcacggaatacttggtgcatctgcttcattatatgataataaagatgcacttaagagtgtatacacgcaggagttccatttctgcgaaaaagtgaaggagaagctggagcatgatgcttaccaggagtttttgaaatgtcttcacatatacagccaggaaattattactaggagtgaattgaagaacttggtgaatgatatacttcagcagcatccagatcttatggatgggtttaatgaattcttggagcactgtgagaatatagatggttttctggctggtgtcttcagtaaaaggcaaactggacgaattgttaaaactgaggaaaggaaagagggaggaaagggaacagaaaaagaaccggacagaatcgagaaagtaccagcatataaggaagctcctagccaaaaacctgtgttctctagcaaagaaaagtatatatacaaacctgtatcagagctcgatctttcaaattgtcagcggtgcactccaagttaccggcttctacctaaacattacccaatgcctcccgcaggcaacaagactgagcttggagcttcagtgcttaacgatcactgggtatcagtgacatcaggaagtgaagactattcatttaagcacatgagaaagaatcagtacgaagagagtttatttagatgtgaagatgacagatttgagttggacatgctgttggaatcagttaatgcagcaactaagcgtgtcgaagagttgatagaaaagatgcaagacaactccctaaaaccagatagcccaatacgcatcgatgagcatttaactcctttgaatctgaggtgcattgaacggttatatggtgaccatggtctggatgtgatggatgtccttcgaaagaacgctagtgttgctctaccagtcatcttaactaggcttaaacagaagcaggaagaatggtcaaggtgccgatcagatttcaacaaggtttgggcagagatatatgccaaaaattatcacaagtctcttgaccaccgcagtttctatttcaaacagcaagatacaaagaacctgagcacaaaatctctattaactgagatcaaagaaattaatgagaagaaaagaaaggaagatgatgtgctccttgctattgctgctggaaataggcgtccaatagttcccaatatgtcatttgactatgtagattcaaacatccatgaagatatgtataagatcattaagtactcctgtggtgaagtctgcagttcctcagaccaactggacaaagttgtgagaatttggacaacttttctggagccaattttgggtgttcagcctcggacacatggtgctgaggatgcagatgcagtcaaacccaagagtcgaaccacaaagtctggtcttgcaactgttggggaaatcaacactactgcagcaggggctgttgccaagcatggccatgatgaaaatattccacaggagcaaacaccgtcatctctggctagaatggtgaatggagtagcaacagatactcaaaatggtttccatgatgttgatcgaactgctcgtagggctgaggaaccatcgaatactgccgtaaatggaagagtgcaaggtgcttcccctggaactaatgaaattcccgctgttagtacccaaaacatgcctaccgagaggtctgcagagaacattcctgttgctaggactgaacagcatggcaatgctaaagcaaatttggaaccaacatcaggtgtgaatgcttctagaagttctcatgctggaaatgacactgctgctgaagcccgggctggaaatgaaacattaccatcagtagagggtggagaaacagggaggtcaggatcaactttaaatggtggaggtgcaagtgagggtaacaaagggcgcctattcaatgaagcttctgcatcccacaataccccaaaagttgaaagagaagagggtgaattatctcctaatggggattttgaagaggacaattttgcgccttttgaagatggagctgtagatggagtatctaaagcgaaggaaggttccacaagcagaccattccagggtaggtctggagaagcacaaccatcttgtgctgaagcagctggtgagaatgatgctgatgctgatgatgagggtgaggaaagcgcacaaaggtctaccgaggacagtgagaatgcctccgagggtggtgaagatgcatcaggaagtgaatctggtgatggtgaggagtgctctcgtgaagatcatgatgaggaagaggaagatatggatcatgatgatcaggatgccaaggctgaaagtgagggtgaggcagaaggaacaactgagacacatgatgtggaagggggaatatcactcccgctatcggaacgctttctacactccgtaaaaccacttgccaagcatgtacccacagctttacatgaccgagatgaaaagtcctcgcgtatattttatgggaatgattcattttatgtactgttcaggctgcatcagatcttgtacgaaagattactttcggctaagacaaactcatccagtgctgaaaagaaatggagaacttccaaggatacaaacccacctgacctatatgcaaagtttataagtgcactttacaacttgctcgatggttcttcggataataccaagtttgaggatgactgccgttctatcattggtactcagtcctatgttctgtttactttggataaactgatatataaagttgtgaagcagcttcaagctatagcaacagatgaaatggacaacaagcttctccagctttatttatatgaaaaatcaagatcccctgggaggttctttgatctagtctatcatgaaaatgcacgcgtgctcctccatgaagagagcatataccggtttgaatgttgctcaaatcctacaaaattgtctattcagctgatggaatatggccatgaaaagcctgaagtgactgcagtatcaattgatcccaatttttcctcgtatctttttaacgagtatttgtcgagtatgtcagacagaaaattgtctgagggtgtcttcctggaaaggaataagcggaagcattcaaataacgacgagccttcagattcgttgaaggccatggatggtgtcaaagtcgctaatggccttgaatgcaagatatcatgcaagacctctaaggtctcatatgtccttgacactgaagatttcttatttcgattgagaaagaggaggagattttcacctgttggaaatgtgcctgagaagctgcaggcttcaaaaacatatgctgcgaaagtgcagcgcttccatagatttctatccaagccttag</cdnaseq>

Protein Sequence

<aaseq>VMRDFKSERIDTNGVIIRVKTLFNGYPELILGFNTFLPKGYAIK LQEEKKPVDFVEAINFVNKIKNRFQHDEHVYKAFLDILNMYRKDNKSIQDVYHEVAVL FADHKDLLEEFQHFLPDTSVPPQAVAPSRPGIRRDDRTSLVPPASRNEKRDKAHPHAD RESVDRPDLDHVIQRRRPKDRHDYDRGDKDGELDSKDLDIGLKRKPFPRKMEDPTSAD AHHGGPLENHGILGASASLYDNKDALKSVYTQEFHFCEKVKEKLEHDAYQEFLKCLHI YSQEIITRSELKNLVNDILQQHPDLMDGFNEFLEHCENIDGFLAGVFSKRQTGRIVKT EERKEGGKGTEKEPDRIEKVPAYKEAPSQKPVFSSKEKYIYKPVSELDLSNCQRCTPS YRLLPKHYPMPPAGNKTELGASVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDD RFELDMLLESVNAATKRVEELIEKMQDNSLKPDSPIRIDEHLTPLNLRCIERLYGDHG LDVMDVLRKNASVALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFY FKQQDTKNLSTKSLLTEIKEINEKKRKEDDVLLAIAAGNRRPIVPNMSFDYVDSNIHE DMYKIIKYSCGEVCSSSDQLDKVVRIWTTFLEPILGVQPRTHGAEDADAVKPKSRTTK SGLATVGEINTTAAGAVAKHGHDENIPQEQTPSSLARMVNGVATDTQNGFHDVDRTAR RAEEPSNTAVNGRVQGASPGTNEIPAVSTQNMPTERSAENIPVARTEQHGNAKANLEP TSGVNASRSSHAGNDTAAEARAGNETLPSVEGGETGRSGSTLNGGGASEGNKGRLFNE ASASHNTPKVEREEGELSPNGDFEEDNFAPFEDGAVDGVSKAKEGSTSRPFQGRSGEA QPSCAEAAGENDADADDEGEESAQRSTEDSENASEGGEDASGSESGDGEECSREDHDE EEEDMDHDDQDAKAESEGEAEGTTETHDVEGGISLPLSERFLHSVKPLAKHVPTALHD RDEKSSRIFYGNDSFYVLFRLHQILYERLLSAKTNSSSAEKKWRTSKDTNPPDLYAKF ISALYNLLDGSSDNTKFEDDCRSIIGTQSYVLFTLDKLIYKVVKQLQAIATDEMDNKL LQLYLYEKSRSPGRFFDLVYHENARVLLHEESIYRFECCSNPTKLSIQLMEYGHEKPE VTAVSIDPNFSSYLFNEYLSSMSDRKLSEGVFLERNKRKHSNNDEPSDSLKAMDGVKV ANGLECKISCKTSKVSYVLDTEDFLFRLRKRRRFSPVGNVPEKLQASKTYAAKVQRFH RFLSKP</aaseq>

Gene Sequence

<dnaseqindica>7719..7871#7529..7640#7286..7449#6928..7080#6713..6851#6526..6626#5783..6454#5411..5496#4672..5337#4321..4575#4091..4218#2650..2804#2349..2569#2234..2263#2050..2125#1805..1938#1296..1578#599..757#411..509#139..307#1..26#gtcatgcgcgatttcaagagtgagaggtctctctactctctccctatcggatccctaccgctttacatatctcacttcaccgggatatattgacttgtctgccttccatgactgtcttgtggtgcaatctcgatgcaggattgataccaacggagtcattattcgtgtcaagacactcttcaacgggtaccctgagctcatccttggcttcaataccttcttgcccaagggttatgcaatcaagctgcaggaggagaagaagcctgttgatttcgtggaagccatcaatttcgtaaacaagattaaggtataaatacacgtgcatacgttatgtgcaactattttccctaggtaataaccgccgtgatacgtagcgatttatgtcatttattattgcttcttttctacagaatcggttccagcatgatgagcatgtctataaggcattcttagacatcctcaacatgtaccgcaaggacaataaatccatccaagatgtttaccatgaggttcctattccctccttttttttctttggccctgcatactatgcgacgcttccgataggagaagttaattagctttgtctttttggcaggttgctgtgttgtttgcagaccacaaagatttactcgaagagttccaacacttcttgcctgatacctccgtgcctccacaagctgtggccccttcaaggcctggtattaggcgggatgacaggacctctctggtgcctcctgctagtaggaatgaaaaggtataagtgccctactattttgtagagcgaagtgctatcaatgaccttatcttgtaaccttaatttactttcagtttcaatctagtgcctaggaggtagttctctagttggcagaaaatactatatcacgttaattatagggaagaagccacatttgcttgacttttgaggaagctgttggcaaaatatggtgcaagaatcaagtgttgcaaatgcaaggagaaacaaaaggaaaacatatgaactctcgttgctaccaaacatgtaatagggaattcatggagtacctggccgtcgactctcatgaacaggatgtgccatataggttaaacgacgccatttattaattttggcatgttactcccttttatgaactaaacattttactccaaagcgtttttaattgttttactatctggggttagaatgaggccaacatgaggcatttcattatgtaggcaagtcccttgttctgctaatatgcttaagctaatataacataaagttagctgaccggttatctcacttctgtgttcagagggataaggctcatccacatgctgaccgtgagagtgttgatcgtcctgatctggaccatgttatccagcgaagacgccctaaggataggcatgattatgatagaggcgataaggatggtgaacttgacagcaaagatcttgatataggacttaagcgcaaaccttttccaaggaagatggaggaccctaccagtgctgatgcacaccatggagggcccctggaaaatcacggaatacttggtgcatctgcttcattatatgataataaagatgcacttaagagtaagtctcttaaaatacaggattgatgtttttgtctggtcatcacagtacattttcttctctacattactattttattttgtccttcaaatgcaagttaggagctgcattatgtaagaacatatgcatgtctgttgcttatccctgttgcagcatatgcctggagaattctgctgcctttccacttttcaattacttatatttacatgtttcctcgcaacatcaggtgtatacacgcaggagttccatttctgcgaaaaagtgaaggagaagctggagcatgatgcttaccaggagtttttgaaatgtcttcacatatacagccaggaaattattactaggagtgaattgaagaacttggtagggttcctatatattcatgctattctgaaatttttaaatgacctctgcctttcttatctgagtggtgttacttgatatgtgatcatgaacatcgtcactgtgttacaggtgaatgatatacttcagcagcatccagatcttatggatgggtttaatgaattcttggagcactgtgagaatataggtaggtcgcatatttaaaatgtatccatgatcattcttgcaagatttctttcgttggttttagatttcatggtttcatctccgaaacattctctctctctccctgcagatggttttctggctggtgtcttcagtaaaagtatgcaatcagtgctttcaacttagtatccccttattctttctccttttagaatctcatgttaacactaattatattaatgaagggcaaactggacgaattgttaaaactgaggaaaggaaagagggaggaaagggaacagaaaaagaaccggacagaatcgagaaagtaccagcatataaggaagctcctagccaaaaacctgtgttctctagcaaagaaaagtatatatacaaacctgtatcagagctcgatctttcaaattgtcagcggtgcactccaagttaccggcttctacctaaacatgtaagctaatttagatcatgttttttttttgttgatgactgatatgttttgtttaacatatggtttaatcctgtttccagtacccaatgcctcccgcaggcaacaagactgagcttggagcttcagtgcttaacgatcactgggtatcagtgacatcaggaagtgaagactattcatttaagcacatgagaaagaatcagtacgaagagagtttatttagatgtgaagatgacaggtgctgatttatgtttctagtaaacatagcatgaacatgcttttacatatttattgccatagtccctttggtaagagtagtcatttattttatcactttaatcaacggctcaactcttcaaacctactatcaatgttcggttctatgctgtgggctaatattgatatcctcacctgagtattgtggaagtagactcataattgtgtgcaatcgaaggtttcatgatgacaactgggatccttgagtcttcaagagtgtcgcggacttgtggttgtaaaattttgctatcctgcttgtgcacatgttataagttagtcaatatgttgatatggtattttgcgttgcttcttgagttagatgtggcatacgcagtagtaactaatggtgttgttgatttggttgtccagtcacacatgtcactatctgtattgtacaataccatgcctttcgggtttcatgaattgtggttggaatccaccctagatggaataggggtcttggtctctatgcttcaagagaaggcatttctccactatctaaaaggaaatgaacattaactaaaaggaacttatgagtatactgtaacttccctgattggtcaaaacatgtgtggcccgtattagattacatctcatgtaccgcttgtgtttttgaacaactgtagatcttcatcgcatgcttctctgatgtgtgttccttgtattttccctttagattttcttgagagaagctcatcgaggagatttttgctaagtgattgttaggaattattaagtagtgaaattaattaaacatgaactaagtcatacaagaacttctttactgtttgtcggtaattggtttctggagatattgaggtggttttcctatttgatgcttacaatgtaaccagaaacctagttttcctggtttcctgcattgtgctcaagtttaattggcacctgcactaaagctgtgctctgccaatgcatgcatgcatgccagcttgaatagatgtttttccatttccatatcctcctgactgggaaactaaataactaatgcttagttcttgcattgagcatcttgagttgtgggcatgaagcatgtggaagagacattacatctctttaaatatgtttctacaacgatgccattcgttgaggatgacaggctctttagactatagtaacaatgttgtgtaactggcatgtctaataaatcataactatcccctgcgattactgtttatatcgggtcatcttttgatgctgattgcaaactggtctgtttttttttcttttcagatttgagttggacatgctgttggaatcagttaatgcagcaactaagcgtgtcgaagagttgatagaaaagatgcaagacaactccctaaaaccagatagcccaatacgcatcgatgagcatttaactcgtatgcatcttttatttgtttaatttgtattgttatgtttggtaatgcatgatacggaggttgcttgactgcccttatgggttatttgtaactgttttacagctttgaatctgaggtgcattgaacggttatatggtgaccatggtctggatgtgatggatgtccttcgaaagaacgctagtgttgctctaccagtcatcttaactaggcttaaacagaagcaggaagaatggtcaaggtgccgatcagatttcaacaaggtttgggcagagatatatgccaaaaattatcacaagtctcttgaccaccgcagtttctatttcaaacagcaagatacaaagaacctgagcacaaaatgtacgtgcggtttttgttgcctgtaatttttttcttatgttagttccagccttgcctggtcgtagaatatttctaattatactcttccttctatagctctattaactgagatcaaagaaattaatgagaagaaaagaaaggaagatgatgtgctccttgctattgctgctggaaataggcgtccaatagttcccaatatgtcatttgactatgtagattcaaacatccatgaagatatgtataagatcattaagtactcctgtggtgaagtctgcagttcctcagaccaactggacaaagttgtgagaatttggacaacttttctggagccaattttgggtgttcagcctcggacacatggtgctgaggatgcagatgcagtcaaacccaagagtcgaaccacaaagtctggtcttgcaactgttggggaaatcaacactactgcagcaggggctgttgccaagcatggccatgatgaaaatattccacaggagcaaacaccgtcatctctggctagaatggtgaatggagtagcaacagatactcaaaatggtttccatgatgttgatcgaactgctcgtagggctgaggaaccatcgaatactgccgtaaatggaagagtgcaaggtgcttcccctggaactaatgaaattcccgctgttagtacccaaaacatgcctaccgagaggtctgcagagaacattcctgttgctaggactgaacagcatggcaatgctaaagcaaatttggaaccaacatcaggtatccatttctgttccttggaacctcttttggtttgtttttgctggtggttatgttttgtcttgccttctaggtgtgaatgcttctagaagttctcatgctggaaatgacactgctgctgaagcccgggctggaaatgaaacattaccatcagtagaggtatgaacacattcttctatggctagttttactttcaatatctcttaccattatcttatggtccttttccccatcgaagatgttttttccccttttgttggttgcttactttattatctttttgtttgtttgttgccacaatgatggtgtcatatggaattgatgagcttgtgttgaatcttttccatataaaatggaacagtcatttgttttgcctaccgagatggcaagatggatgcaacaaatcaatgagaactcataatctatgtttctgttctctttgcagggtggagaaacagggaggtcaggatcaactttaaatggtggaggtgcaagtgagggtaacaaagggcgcctattcaatgaagcttctgcatcccacaataccccaaaagttgaaagagaagagggtgaattatctcctaatggggattttgaagaggacaattttgcgccttttgaagatggagctgtagatggagtatctaaagcgaaggaaggttccacaagcagaccattccagggtaggtctggagaagcacaaccatcttgtgctgaagcagctggtgagaatgatgctgatgctgatgatgagggtgaggaaagcgcacaaaggtctaccgaggacagtgagaatgcctccgagggtggtgaagatgcatcaggaagtgaatctggtgatggtgaggagtgctctcgtgaagatcatgatgaggaagaggaagatatggatcatgatgatcaggatgccaaggctgaaagtgagggtgaggcagaaggaacaactgagacacatgatgtggaagggggaatatcactcccgctatcggaacgctttctacactccgtaaaaccacttgccaagcatgtacccacagctttacatgaccgagatgaaaagtcctcgcgtatattttatgggaatgattcattttatgtactgttcaggctgcatcaggtgagcttccagaaatcttgatcttgtgtcttcgcttgtgctctcgtctgctaaagttgttttaattgcagatcttgtacgaaagattactttcggctaagacaaactcatccagtgctgaaaagaaatggagaacttccaaggatacaaacccacctgacctatatgcaaagtagtgctgctttcctatattgtctaattacttataccaccttaccataaatatgatgaataatcaatctgtcaattttgatgaaggtttataagtgcactttacaacttgctcgatggttcttcggataataccaagtttgaggatgactgccgttctatcattggtactcagtcctatgttctgtttactttggataaactgatatataaagttgtgaagcaggtatgttgtcgtccattattctatatgtcattttggcttggatgcaagattcactgtttgatttacctggtaccagcttcaagctatagcaacagatgaaatggacaacaagcttctccagctttatttatatgaaaaatcaagatcccctgggaggttctttgatctagtctatcatgaaaatgcacgcgtgctcctccatgaagagagcatataccggtttgaatgtgtaagcttcattctgctctgcagactactatgagttccttcatgtacttgtagttgtgtgttccctcttgtatgttaataaaatgatgatagtgtttcttatgtgttcaaaagaacaggttcaccttgtactacggtagtgttagtgctttcttgtgctatagaaatatagatgactaaaggctgttttgtttttcatatcgcagtgctcaaatcctacaaaattgtctattcagctgatggaatatggccatgaaaagcctgaagtgactgcagtatcaattgatcccaatttttcctcgtatctttttaacgagtatttgtcgagtatgtcagacagaaaattgtctgagggtgtcttcctggaaaggtattttatccccttaataaaactgaaatgtatctaatgccatgtctccggtattcatggtcttgtactgttatcccaggaataagcggaagcattcaaataacgacgagccttcagattcgttgaaggccatggatggtgtcaaagtcgctaatggccttgaatgcaagatatcatgcaagacctctaaggttactatctttttctttggcaggtagttcgagtgcatccagttttactggaaattaatcgtatgtgatgatatgcaggtctcatatgtccttgacactgaagatttcttatttcgattgagaaagaggaggagattttcacctgttggaaatgtgcctgagaagctgcaggcttcaaaaacatatgctgcgaaagtgcagcgcttccatagatttctatccaagccttaggggtcatcggcaaaatactggtaattccactaggtttcagaaagtgttaagccctaggcaaagttgcatgatgttgtgttagtggcagggcactgaatatcatttttgctgcattgcagtccttgttgtaactaaatcaggagatgctgctgccgagatcgcgactgttttgcttcgatattgagagaagaagctgtgggagattgatcgattgacccccttggaataacaagtgcttgctgctgggaagaggacgatgttacagaatactatataacagggtaaatacaggaggagaggaaagcaaatcaaagcaaagcatgagtgagcaccgcagtcagctccgatgtgctgaaagaagtgtttgttgtacatatgtattagcagaattaatgttgtttgttcagtaaggtccaggtttaccaatattaattgtttacttactgctctctctctctctcggtcgtaggaggatggatattattctattaactcatcatcaaatcatttgttgctgttggtataggcccctctgttttttgacccacccatgtttttgattgaatctaacgttgtcaaacacagctattgtaatcgatcgatctatccctttggtaaattagacagacttgtaatacatacactaataatttctaatagctgctctgttacatgcgtttactgattt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0109700, RefSeq:Os01g0109700