Os01g0103700

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Revision as of 04:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0103700| Description = Conserved hypothetical protein| Version = NM_001048293.1 GI:115433999 GeneID:4326450| Length = 5251 bp| Definition ...")
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Gene Name

Os01g0103700

Description

Conserved hypothetical protein

Version

NM_001048293.1 GI:115433999 GeneID:4326450

Length

5251 bp

Definition

Oryza sativa Japonica Group Os01g0103700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:190037..195287

Sequence Coding Region

192864..194429

Expression

GEO Profiles:Os01g0103700

Genome Context

<gbrowseImage1> name=NC_008394:190037..195287 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:190037..195287 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttctcacatgggagcagattttgataagttaaaattcgacccaactgaatttagtagcaagaaggaagtatttatagtgcgtaatataattctttcgacactcaagtttgcaaatacttgtcataatatgctttctaaaactcctggtgctagctgcaatctttatgatagaatcaaggagctgattgagtgtgtgcagcagaatgcttctcagtattgtagcacatacgaatttttccatctgataatgtgtgcttgtatttcatggtatgcttgtaaaactagagatggcaatcaagaatcaggtgatccaacagaacagcctgacatattctctagtccttctatttggttaactcaggagctctgtgcgattcggataacaaaaatgcttttcagaaagcagaggtattgggatgcctatatgtctgctatgtactgttgtcgtgaaggcctctggtttgtggtgtcgtttgtctttagaaaacttgcagatgattttgggtcaggctctttcagtttttggttcaaatcattgctgcttatttcagctggagaaattgagatgaagctactgcttttcccttcagcaatcattaagttggtcagtgagcttaaaacagattgcgatcttcatgagagtttttactgtgttgaaacaaatgttgacagtagtcttgctggctcttcagagttgcatggttcccaagcaaagattactgatatttgcagcaaaacattcttagctactgatcacctcttatcgaatacctcttcaagtcatgagctgtttttccagaggtggtttattagtctcagggcatcgtttcttgagatcctagcagattttcttggtatccttactgcacatttaactgatcagagagatgaatctcatcatgatgctattggagaccattccagtgtacctagagagcataataacagccaattacttgctttggtgaattgttcattacgattaagtgaactggcacatagttatgatctacttgctgtatcccatggggacatggatcgccaaagtttttctagcatagccaggcttgctttcatgtgctcacttctggcattttgtattgcattttctgtggatttctcaaaggtacatagtagtgtggagtcttgcaggcttccagagaggttttctcacgcttcagttgtacaagatttacatgaaagagtggataggactgatagccaaattgtttcacaactgcaacaattaatgcccatttgttgtgataaagtgcactccatacagattgtcacaagaatgaattgtgaattgttcaggtattctggaaaaggattcttatcgtctttgcaaatttgctgtggcatatttcctccgcttacgtggggacaccaaaggaatagcgactggagaggacagtgtatctcctttgcatggagggatgcaatttctgtccagcattttacagagggttatggaattgccatttgttctacccaaatacttcttcagagtaaggtaacgtatgcgtgttgttctcttaaaattagttgttgtggatga</cdnaseq>

Protein Sequence

<aaseq>MASHMGADFDKLKFDPTEFSSKKEVFIVRNIILSTLKFANTCHN MLSKTPGASCNLYDRIKELIECVQQNASQYCSTYEFFHLIMCACISWYACKTRDGNQE SGDPTEQPDIFSSPSIWLTQELCAIRITKMLFRKQRYWDAYMSAMYCCREGLWFVVSF VFRKLADDFGSGSFSFWFKSLLLISAGEIEMKLLLFPSAIIKLVSELKTDCDLHESFY CVETNVDSSLAGSSELHGSQAKITDICSKTFLATDHLLSNTSSSHELFFQRWFISLRA SFLEILADFLGILTAHLTDQRDESHHDAIGDHSSVPREHNNSQLLALVNCSLRLSELA HSYDLLAVSHGDMDRQSFSSIARLAFMCSLLAFCIAFSVDFSKVHSSVESCRLPERFS HASVVQDLHERVDRTDSQIVSQLQQLMPICCDKVHSIQIVTRMNCELFRYSGKGFLSS LQICCGIFPPLTWGHQRNSDWRGQCISFAWRDAISVQHFTEGYGIAICSTQILLQSKV TYACCSLKISCCG</aaseq>

Gene Sequence

<dnaseqindica>2828..4393#aagtagaaagaaacacaagaagaagaagaagggttaccggcgggcggcggcggccatggccatgcaatggagcatcgacctcgacagggctctccgctcccgccaccccaccccggtcagtactggtacagctacccctcagcaatctcagtcaatctaatctccctagcatgcagccacgccatcgacgctagctattgcccctcgtctccgggacctcggacctagcttcttcgccccccgccttgggcctccgaaccgcgcctcttcgcccacaccatcctcctccgcctcctcgccacccacttcaccaccgcccacaacgcccgcatcctccgcgccctcctcctccttcgccgcagcatgtgtgcaggaacccaggccgcctaccacgctgcctgcccccaggccagggcactcgcgctgcggatgttcgcccaccaaagccctgcatatccgctctctcattctctccaccttctcttcctccaatgcacggcgccactggtctatttctttctttaccatttaccactacaccagcgcaaagtttagacaccactaattattatgcttatcatttcgcaggtcaacgcggcattgtttgcggctggctgtttttaggctatcagtggatttctcttacattacacttgaagcacttccaaggttaataattgcttcaccaacaacacaagctcaaattatcatggcagcaattaagattttccccaagcttgactgtactgtacgttgcctgttatccatagagttcatgaggtgttaatggatatatgtgtgcttcttggttaaattcgatttttttttactcttaagttggccaacatttgcattgcttgttcacttcttacatacgaggcatcattcattggtttaacaatagatacctatcaatcatgtgcacatactccagtccaaggaatcataaagtcaaagaaagaaatttaaaattacacactgctctgatttacagtgatagtagtataatctagtccttgaacacctaagctgttagttattacaagtgtgaagttagtttttgcattacgggttaatgtgaagaccaaagctctgaaaacatcctatgaaaaaaataaggcatctatgaaataggtaaaaatgtgatgatactctcgatgctatctgtcgactttatgttgtgaaattggacttaccaataaaactggctagtgttctgaaatggagtagtagaacataagggactaatgatatatttttctttatacatcgaccttaggtggatgctctgcattgttttttttttcttgcagttgttttcaccacattttaaggaagcatttttcactcttgatgtcacaggttggaaagcagatcgttctgggcacgttggaagataatttcaaagctgacatgctcttgtcactctcaagattggcatccaagtcagttcttctgtttggcgatcaggtagtgtaatccactagttggtagcatatgtatttgacttaatttgttctaaaccatcactgcaattatgttctgtgttacataatttagttcactttgcaataatcatgtgtctgtgtttactgtttatattatactctctttgtttgtgaatgcttggcactttataacctgattcatgttttctcaaacctctgaagaaacaattaatggcatcccatttcctcatgtcatttcctgtgattgacatgctactgaaagataccttagtgacattataaaaattagatatgacaatcaagaatcaggtgattcaaatttctttttgagttactagctatctgtatttgtttaccctcttgctgacaagctggggtcattaataccaatgttctctgttccctttgtgaattgatttcgaagtaaactttatttcgatttactatttcaggtggaattgctgttattgttcctggagcatgaatcttctcattgcatgaagaccgtgtcattgaaatgtttatgttttatgtttcacggaagcatctgccattttcctgttttaaggactgtttttggaacgttattacagctaattgatgatgatgatttcccacttgattgtaagagagatgcatttacggttcttcaaaaggtgaacactaaggtcttctgttcgtgctgtctagatatctctttttcctcattatgatagctgattgatttataaaaacttttcagatagtctgtggcaaagctccaattgttcattttgtcgatacttctgagctatctaagcttgttctggctgctgagagttctttgcattcttcttcctgggagatgcaaggtactgctcttaaagttattgctggcaccttatgttgtcttcagcaaacaagatcacatcagaacatgattactcaggaaggttcatcattgacttacaatgggtgtcaagggattaccagcaacttcctgtcaactcatgtagaaaatgatgaggacaaattcgtgcataagattgtaacatcaatggtgaatcataatatatctctggtcaatcaaataataagcactggaaacaaggaagcaacaaggagacatacttatatgtcctctgaattcaagatgtacagatctatgttaagcagtatgctaaaacttcttgtgtgctaccccttctgctgctgctgttgctcttgataaactaagaggcctgataaaagaactagcccgactagatgacagtgattgctccaaagtttctgttgccaatgttgaatcatttcaaacatattctgcccgtgaagtacttggcacttcaaatgatattaagccagagactgctagtgtgatggcttctcacatgggagcagattttgataagttaaaattcgacccaactgaatttagtagcaagaaggaagtatttatagtgcgtaatataattctttcgacactcaagtttgcaaatacttgtcataatatgctttctaaaactcctggtgctagctgcaatctttatgatagaatcaaggagctgattgagtgtgtgcagcagaatgcttctcagtattgtagcacatacgaatttttccatctgataatgtgtgcttgtatttcatggtatgcttgtaaaactagagatggcaatcaagaatcaggtgatccaacagaacagcctgacatattctctagtccttctatttggttaactcaggagctctgtgcgattcggataacaaaaatgcttttcagaaagcagaggtattgggatgcctatatgtctgctatgtactgttgtcgtgaaggcctctggtttgtggtgtcgtttgtctttagaaaacttgcagatgattttgggtcaggctctttcagtttttggttcaaatcattgctgcttatttcagctggagaaattgagatgaagctactgcttttcccttcagcaatcattaagttggtcagtgagcttaaaacagattgcgatcttcatgagagtttttactgtgttgaaacaaatgttgacagtagtcttgctggctcttcagagttgcatggttcccaagcaaagattactgatatttgcagcaaaacattcttagctactgatcacctcttatcgaatacctcttcaagtcatgagctgtttttccagaggtggtttattagtctcagggcatcgtttcttgagatcctagcagattttcttggtatccttactgcacatttaactgatcagagagatgaatctcatcatgatgctattggagaccattccagtgtacctagagagcataataacagccaattacttgctttggtgaattgttcattacgattaagtgaactggcacatagttatgatctacttgctgtatcccatggggacatggatcgccaaagtttttctagcatagccaggcttgctttcatgtgctcacttctggcattttgtattgcattttctgtggatttctcaaaggtacatagtagtgtggagtcttgcaggcttccagagaggttttctcacgcttcagttgtacaagatttacatgaaagagtggataggactgatagccaaattgtttcacaactgcaacaattaatgcccatttgttgtgataaagtgcactccatacagattgtcacaagaatgaattgtgaattgttcaggtattctggaaaaggattcttatcgtctttgcaaatttgctgtggcatatttcctccgcttacgtggggacaccaaaggaatagcgactggagaggacagtgtatctcctttgcatggagggatgcaatttctgtccagcattttacagagggttatggaattgccatttgttctacccaaatacttcttcagagtaaggtaacgtatgcgtgttgttctcttaaaattagttgttgtggatgagaagttcaccatgctggatcacttaatttttttttcacaagccacatgtgcctatttaatacatagatgatcgcagagttttattttatgtatatctcactattcctctctgaaatttgtgtttcagtaatgcatcgctcgaatagatatctgtaataatggttagcttgtttactatatatcttgcaggccttgctttggtgctgaacttcatatatatgattcaaatccagaaaacagagacgggatatcagtaccaagtggcctccagctttccctaaccctttgcttgcagtggaaatgtgtgttaggagtaacattgatatctcgaagctactcgaagctatactgcgttttagctgcaagctcagcatcctgctgcttagatgcaacaggaacaagaagcaaagagtttgagatacacaagaaaactgctggaatggttggtcttaataccaagctgatgcagtacatagaggatgatttgagaaagaagagggagaagaagaggaaaaaggtccgtgtggaggagaaggaaatggtgacagcatttgcgcgtttcgaagcaagtgacagtgggatgggattctctagctacctgctggatgtgtctgaatttcctcaaggttcatacaagatgaagtggcatgcgtgctgcatcgacaaagatggcgcctattatagcttgctgcctctcaacgacggcgcagccttctccgttcgcaagtcttgacagccttagacatctcttgttaacttataatcgtcgcaactagattactagactagtgtttttgtatttagagacaaacaaattgcattacaacaagacttgttagtagcatatgtttcatgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0103700, RefSeq:Os01g0103700