Os01g0100700

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Revision as of 04:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0100700| Description = Similar to 40S ribosomal protein S5-1| Version = NM_001048273.1 GI:115433959 GeneID:4326457| Length = 1502 bp| Defi...")
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Gene Name

Os01g0100700

Description

Similar to 40S ribosomal protein S5-1

Version

NM_001048273.1 GI:115433959 GeneID:4326457

Length

1502 bp

Definition

Oryza sativa Japonica Group Os01g0100700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26143..27644

Sequence Coding Region

26221..26292,26370..26641,27090..27293,27365..27419

Expression

GEO Profiles:Os01g0100700

Genome Context

<gbrowseImage1> name=NC_008394:26143..27644 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26143..27644 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtggtcgagcagccgcagcagcaggtggtgaagctcttcaactgctggtccttcgaagacgttcaggtgaacgacatatccctcgccgactacctcgcggtgtcctcgacgaagcacgccacctacctgccgcacacggctggccgctactcggcgaagcgcttccgcaaggcgcagtgccccctcgtggagcgcctcaccaactccctcatgatgcacggccgcaacaacggcaagaagatcatggctgtccgcatcgtcaagcacgccatggagatcatccacctcctcaccgacgccaaccccatccaggtcatcgtagatgccatcatcaacagcggcccgcgtgaggacgcaacccgtatcggctctgctggcgctgtgaggaggcaggctgtggatatctctcccttgaggagggtcaaccaggcaatctacctcctcaccactggcgccagggagagtgcctttaggaacatcaagaccattgctgagtgccttgctgatgagctcatcaatgccgccaagggctcatccaacagctatgccatcaagaagaaggatgagattgagcgtgttgccaaggcgaaccgttga</cdnaseq>

Protein Sequence

<aaseq>MAVVEQPQQQVVKLFNCWSFEDVQVNDISLADYLAVSSTKHATY LPHTAGRYSAKRFRKAQCPLVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDA NPIQVIVDAIINSGPREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFR NIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR</aaseq>

Gene Sequence

<dnaseqindica>79..150#228..499#948..1151#1223..1277#gcgactcgttaggctactccacccactcttgtttagggtttccctcagccgccgccgccgcatccacgctcagcagccatggcggtggtcgagcagccgcagcagcaggtggtgaagctcttcaactgctggtccttcgaagacgttcaggtttgcctgtcctcccattatactagtaagcaagtaggggtactcgtctggtctgtcgataactctcgttggcgcaggtgaacgacatatccctcgccgactacctcgcggtgtcctcgacgaagcacgccacctacctgccgcacacggctggccgctactcggcgaagcgcttccgcaaggcgcagtgccccctcgtggagcgcctcaccaactccctcatgatgcacggccgcaacaacggcaagaagatcatggctgtccgcatcgtcaagcacgccatggagatcatccacctcctcaccgacgccaaccccatccaggtcatcgtagatgccatcatcaacaggtaccaccgtccaattcccaattcctttcagttgcgcacttcaattgtccaattcacttttttttcaatcaccctcaccctcttatatgcaaatgcttatcactgtccaatcacccccaccctcactcttatatgcaaatgctcataactgtagtattttttttctttttacaaatacttctatcccaaaatacactcctctattttgcccgtgcaattaatgttatcttactagccaaaaatcaagacgggaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattgtttggtacgagtagtacatacgaaaatgtttgtgttacatgtctaatgtgacaatttactactatcactgaatgaaatgaacacaaataaacaagcatgattgttgttcacagcggcccgcgtgaggacgcaacccgtatcggctctgctggcgctgtgaggaggcaggctgtggatatctctcccttgaggagggtcaaccaggcaatctacctcctcaccactggcgccagggagagtgcctttaggaacatcaagaccattgctgagtgccttgctgatgagctcatcaatgccgccaagggctcatccaacaggtaaatcttgcttctcatttgatgaaatgaggctactgacacatccatgctctaattctgatatgttacagctatgccatcaagaagaaggatgagattgagcgtgttgccaaggcgaaccgttgagtgctgaacccatctcagtgtgctcgagctattgccttgcactgttgccagtactttttgctagtctttttgggctttgccagagttacctgtgattttctgtttaatgataagtgctgagaaaatgtagtagtctgttcgctatcgacattgttttattacacccccaatccttgttcctgcatgatctgagttctttatgtgtgattgactgatgattggttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0100700, RefSeq:Os01g0100700