Difference between revisions of "Mat-r"
(Created page with "{{Mitochondrion| GeneName = mat-r| Description = maturase-related protein| Version = GeneID:6450171| Length = 2037 bp| Definition = Oryza sativa Japonica Group ''mat-r'', Mito...") |
|||
Line 27: | Line 27: | ||
AA = <aaseq>RKKEGSKFRPLTVVPPIEKIMKEAIRMVPESIYDPEFPDTSHFRSGRGCHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRFISILKEEIDDSKFFYPTQKQFSAGRLVGGEKGPDSVPNSVLLSALLGNIYLHKLDQEIGRIRQKHEIPLVVKIRSVLLRIGRRIDDQEKYGKEAGFNAPQDNRALIVGRVKSIQRKATFHSLVSSWHTPPTSTPRRRGDQKTPFVFPPSAALAAFLNKPSSLLCAAFLIEAAGLTPRAEFNGREGFNKNLAMRDLLKYCKRRGLLIELGGEAILVIRSERGLARKLAPFKSHSLLIRICYARYADDLLLGIVGAVFLLIEIQKRITHFLQSGLNLWVGSAESTTIAARSTVEFLGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLRSAIHSKFRDLGYSIPIKELTKGMSGRGRLLDAVQLAETLGKNGLKSPQVSVLWGTVKHIRQRSRGIPLLHSSGQSKVPSGVQQAVSRSGMSVLKTKLYTPFGRKAAGEGRGHWAGSFSSEFPIQIEAPIKKILRRLRDRGLISRRRPRPIHVASLTNVSDRDIVNWSAGIAISPLSYYRCCDNLYQVRTIVNYQIRWSAIFTLAHKHKSSARNIIPKYPKDSNIVNQEGGKTLAEFPNSIELGKLGLGQDPNNDGALNYMFNK</aaseq>| | AA = <aaseq>RKKEGSKFRPLTVVPPIEKIMKEAIRMVPESIYDPEFPDTSHFRSGRGCHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRFISILKEEIDDSKFFYPTQKQFSAGRLVGGEKGPDSVPNSVLLSALLGNIYLHKLDQEIGRIRQKHEIPLVVKIRSVLLRIGRRIDDQEKYGKEAGFNAPQDNRALIVGRVKSIQRKATFHSLVSSWHTPPTSTPRRRGDQKTPFVFPPSAALAAFLNKPSSLLCAAFLIEAAGLTPRAEFNGREGFNKNLAMRDLLKYCKRRGLLIELGGEAILVIRSERGLARKLAPFKSHSLLIRICYARYADDLLLGIVGAVFLLIEIQKRITHFLQSGLNLWVGSAESTTIAARSTVEFLGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLRSAIHSKFRDLGYSIPIKELTKGMSGRGRLLDAVQLAETLGKNGLKSPQVSVLWGTVKHIRQRSRGIPLLHSSGQSKVPSGVQQAVSRSGMSVLKTKLYTPFGRKAAGEGRGHWAGSFSSEFPIQIEAPIKKILRRLRDRGLISRRRPRPIHVASLTNVSDRDIVNWSAGIAISPLSYYRCCDNLYQVRTIVNYQIRWSAIFTLAHKHKSSARNIIPKYPKDSNIVNQEGGKTLAEFPNSIELGKLGLGQDPNNDGALNYMFNK</aaseq>| | ||
DNA = <dnaseqindica>1..2037#agaaagaaagaagggtcgaagtttagaccgctcacagtagttccacccatagaaaagatcatgaaagaggcgatcagaatggtacccgaatccatttacgatcccgagtttccagacacatcgcacttccgctcgggtcgaggctgccactcggccctcagacggatcaaagaagagtggggaacctctcgctggtttttggaattcgacatcaggaagtgttttcacaccatcgaccgacatcgattcatctcaatcttgaaggaagagatcgacgattccaagttcttttaccccactcagaaacagttttccgccggacgactcgtaggaggtgagaagggccctgactccgtcccaaacagtgtactactatcggccctactaggcaatatctacctacacaagctcgatcaggagatagggaggatccggcagaagcacgaaattcctcttgtagtgaaaatcagatcggttctattaagaataggtcgtcgtattgatgaccaagaaaagtatggaaaagaagcaggcttcaacgctccccaagacaacagagccctcatagtggggagggtaaagagcatccaacgcaaagcaacctttcattcccttgtttcgtcgtggcacaccccccccacaagcacccccaggcgaaggggagaccagaaaacgccttttgttttccccccttcagcggccctagccgccttccttaacaagccctcgagcctcctttgcgccgccttcctcatagaagccgctgggttgaccccgagggccgaattcaatggtagagaaggctttaataagaatttggccatgagagaccttcttaagtattgcaaaagaaggggcctgctgatagagctgggcggggaggcgatactagttatcaggtcagagagaggcctggcccgtaagctggccccctttaaaagccattccttattaataaggatttgttacgcgcgatatgccgacgacttactactgggaatcgtgggtgccgtatttcttctcatagaaatacaaaaacgtatcacccacttcctacaatccggcctgaacctttgggtgggctccgcagaatcaacaaccatagctgcacggagtacggtagaattcctcggtacggtcattcgggaagtccccccgaggacgactcccatacaattcttgcgagagctggagaagcgtctacgggtaaagcaccgtatccatataactgcctgccacctacgctccgccatccattccaagtttagggacctaggttatagtatccctatcaaagagctgacgaaggggatgagcggaagaggtcgtctactggacgcggttcaactagcggagactcttggaaaaaatggactaaaaagtccccaagttagcgtattatgggggaccgtcaagcacatccggcaaagatcaagggggatcccgttgttgcatagctcaggtcagagcaaggtgccatcaggcgttcaacaggcagtctcacgatcgggcatgagtgtcctgaagacaaaattgtatactccctttggtcggaaggcggcgggggaaggaagggggcactgggcgggatctttcagcagcgaattccccatacagatagaggcgcctatcaaaaagatactccgaaggcttcgggatcgaggtctcattagccgaagaagacccaggccaatccacgtggcctctttgaccaacgtcagcgacagagacatagtaaattggtccgcgggcatcgcgataagtcctctgtcctactacaggtgctgcgacaacctttaccaagtccgtaccattgtcaactaccagatccgctggtccgctatattcaccctagcccacaagcacaaatcttcggcgcggaatataatcccaaagtaccccaaagactcaaatatagtcaatcaagaaggtggtaagacccttgcggagttcccaaacagcatagagcttgggaagcttgggctcggtcaagatccgaacaacgacggagcactcaactacatgtttaataagtag</dnaseqindica>| | DNA = <dnaseqindica>1..2037#agaaagaaagaagggtcgaagtttagaccgctcacagtagttccacccatagaaaagatcatgaaagaggcgatcagaatggtacccgaatccatttacgatcccgagtttccagacacatcgcacttccgctcgggtcgaggctgccactcggccctcagacggatcaaagaagagtggggaacctctcgctggtttttggaattcgacatcaggaagtgttttcacaccatcgaccgacatcgattcatctcaatcttgaaggaagagatcgacgattccaagttcttttaccccactcagaaacagttttccgccggacgactcgtaggaggtgagaagggccctgactccgtcccaaacagtgtactactatcggccctactaggcaatatctacctacacaagctcgatcaggagatagggaggatccggcagaagcacgaaattcctcttgtagtgaaaatcagatcggttctattaagaataggtcgtcgtattgatgaccaagaaaagtatggaaaagaagcaggcttcaacgctccccaagacaacagagccctcatagtggggagggtaaagagcatccaacgcaaagcaacctttcattcccttgtttcgtcgtggcacaccccccccacaagcacccccaggcgaaggggagaccagaaaacgccttttgttttccccccttcagcggccctagccgccttccttaacaagccctcgagcctcctttgcgccgccttcctcatagaagccgctgggttgaccccgagggccgaattcaatggtagagaaggctttaataagaatttggccatgagagaccttcttaagtattgcaaaagaaggggcctgctgatagagctgggcggggaggcgatactagttatcaggtcagagagaggcctggcccgtaagctggccccctttaaaagccattccttattaataaggatttgttacgcgcgatatgccgacgacttactactgggaatcgtgggtgccgtatttcttctcatagaaatacaaaaacgtatcacccacttcctacaatccggcctgaacctttgggtgggctccgcagaatcaacaaccatagctgcacggagtacggtagaattcctcggtacggtcattcgggaagtccccccgaggacgactcccatacaattcttgcgagagctggagaagcgtctacgggtaaagcaccgtatccatataactgcctgccacctacgctccgccatccattccaagtttagggacctaggttatagtatccctatcaaagagctgacgaaggggatgagcggaagaggtcgtctactggacgcggttcaactagcggagactcttggaaaaaatggactaaaaagtccccaagttagcgtattatgggggaccgtcaagcacatccggcaaagatcaagggggatcccgttgttgcatagctcaggtcagagcaaggtgccatcaggcgttcaacaggcagtctcacgatcgggcatgagtgtcctgaagacaaaattgtatactccctttggtcggaaggcggcgggggaaggaagggggcactgggcgggatctttcagcagcgaattccccatacagatagaggcgcctatcaaaaagatactccgaaggcttcgggatcgaggtctcattagccgaagaagacccaggccaatccacgtggcctctttgaccaacgtcagcgacagagacatagtaaattggtccgcgggcatcgcgataagtcctctgtcctactacaggtgctgcgacaacctttaccaagtccgtaccattgtcaactaccagatccgctggtccgctatattcaccctagcccacaagcacaaatcttcggcgcggaatataatcccaaagtaccccaaagactcaaatatagtcaatcaagaaggtggtaagacccttgcggagttcccaaacagcatagagcttgggaagcttgggctcggtcaagatccgaacaacgacggagcactcaactacatgtttaataagtag</dnaseqindica>| | ||
+ | Link = [http://www.ncbi.nlm.nih.gov/gene?term=6450171 NCBI Gene:mat-r] | ||
}} | }} | ||
[[Category:Genes]] | [[Category:Genes]] |
Revision as of 14:21, 27 October 2012
Gene Name |
mat-r |
---|---|
Description |
maturase-related protein |
Version |
GeneID:6450171 |
Length |
2037 bp |
Definition |
Oryza sativa Japonica Group mat-r, Mitochondrion gene. |
Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza. |
Chromosome | |
Location |
Mitochondrion:315812..317848 |
Sequence Coding Region |
315812..317848 |
Genome Context |
<gbrowseImage1> name=NC_011033:315812..317848 source=Rice_Japonica_Mitochondrion preset=GeneLocation </gbrowseImage1> |
Gene Structure (RNA Editing) |
<gbrowseImage2> name=NC_011033:315812..317848 source=Rice_Japonica_Mitochondrion preset=GeneLocation </gbrowseImage2> |
Protein Sequence |
<aaseq>RKKEGSKFRPLTVVPPIEKIMKEAIRMVPESIYDPEFPDTSHFRSGRGCHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRFISILKEEIDDSKFFYPTQKQFSAGRLVGGEKGPDSVPNSVLLSALLGNIYLHKLDQEIGRIRQKHEIPLVVKIRSVLLRIGRRIDDQEKYGKEAGFNAPQDNRALIVGRVKSIQRKATFHSLVSSWHTPPTSTPRRRGDQKTPFVFPPSAALAAFLNKPSSLLCAAFLIEAAGLTPRAEFNGREGFNKNLAMRDLLKYCKRRGLLIELGGEAILVIRSERGLARKLAPFKSHSLLIRICYARYADDLLLGIVGAVFLLIEIQKRITHFLQSGLNLWVGSAESTTIAARSTVEFLGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLRSAIHSKFRDLGYSIPIKELTKGMSGRGRLLDAVQLAETLGKNGLKSPQVSVLWGTVKHIRQRSRGIPLLHSSGQSKVPSGVQQAVSRSGMSVLKTKLYTPFGRKAAGEGRGHWAGSFSSEFPIQIEAPIKKILRRLRDRGLISRRRPRPIHVASLTNVSDRDIVNWSAGIAISPLSYYRCCDNLYQVRTIVNYQIRWSAIFTLAHKHKSSARNIIPKYPKDSNIVNQEGGKTLAEFPNSIELGKLGLGQDPNNDGALNYMFNK</aaseq> |
Gene Sequence |
<dnaseqindica>1..2037#agaaagaaagaagggtcgaagtttagaccgctcacagtagttccacccatagaaaagatcatgaaagaggcgatcagaatggtacccgaatccatttacgatcccgagtttccagacacatcgcacttccgctcgggtcgaggctgccactcggccctcagacggatcaaagaagagtggggaacctctcgctggtttttggaattcgacatcaggaagtgttttcacaccatcgaccgacatcgattcatctcaatcttgaaggaagagatcgacgattccaagttcttttaccccactcagaaacagttttccgccggacgactcgtaggaggtgagaagggccctgactccgtcccaaacagtgtactactatcggccctactaggcaatatctacctacacaagctcgatcaggagatagggaggatccggcagaagcacgaaattcctcttgtagtgaaaatcagatcggttctattaagaataggtcgtcgtattgatgaccaagaaaagtatggaaaagaagcaggcttcaacgctccccaagacaacagagccctcatagtggggagggtaaagagcatccaacgcaaagcaacctttcattcccttgtttcgtcgtggcacaccccccccacaagcacccccaggcgaaggggagaccagaaaacgccttttgttttccccccttcagcggccctagccgccttccttaacaagccctcgagcctcctttgcgccgccttcctcatagaagccgctgggttgaccccgagggccgaattcaatggtagagaaggctttaataagaatttggccatgagagaccttcttaagtattgcaaaagaaggggcctgctgatagagctgggcggggaggcgatactagttatcaggtcagagagaggcctggcccgtaagctggccccctttaaaagccattccttattaataaggatttgttacgcgcgatatgccgacgacttactactgggaatcgtgggtgccgtatttcttctcatagaaatacaaaaacgtatcacccacttcctacaatccggcctgaacctttgggtgggctccgcagaatcaacaaccatagctgcacggagtacggtagaattcctcggtacggtcattcgggaagtccccccgaggacgactcccatacaattcttgcgagagctggagaagcgtctacgggtaaagcaccgtatccatataactgcctgccacctacgctccgccatccattccaagtttagggacctaggttatagtatccctatcaaagagctgacgaaggggatgagcggaagaggtcgtctactggacgcggttcaactagcggagactcttggaaaaaatggactaaaaagtccccaagttagcgtattatgggggaccgtcaagcacatccggcaaagatcaagggggatcccgttgttgcatagctcaggtcagagcaaggtgccatcaggcgttcaacaggcagtctcacgatcgggcatgagtgtcctgaagacaaaattgtatactccctttggtcggaaggcggcgggggaaggaagggggcactgggcgggatctttcagcagcgaattccccatacagatagaggcgcctatcaaaaagatactccgaaggcttcgggatcgaggtctcattagccgaagaagacccaggccaatccacgtggcctctttgaccaacgtcagcgacagagacatagtaaattggtccgcgggcatcgcgataagtcctctgtcctactacaggtgctgcgacaacctttaccaagtccgtaccattgtcaactaccagatccgctggtccgctatattcaccctagcccacaagcacaaatcttcggcgcggaatataatcccaaagtaccccaaagactcaaatatagtcaatcaagaaggtggtaagacccttgcggagttcccaaacagcatagagcttgggaagcttgggctcggtcaagatccgaacaacgacggagcactcaactacatgtttaataagtag</dnaseqindica> |
External Link(s) |