Difference between revisions of "Mat-r"

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(Created page with "{{Mitochondrion| GeneName = mat-r| Description = maturase-related protein| Version = GeneID:6450171| Length = 2037 bp| Definition = Oryza sativa Japonica Group ''mat-r'', Mito...")
 
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AA = <aaseq>RKKEGSKFRPLTVVPPIEKIMKEAIRMVPESIYDPEFPDTSHFRSGRGCHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRFISILKEEIDDSKFFYPTQKQFSAGRLVGGEKGPDSVPNSVLLSALLGNIYLHKLDQEIGRIRQKHEIPLVVKIRSVLLRIGRRIDDQEKYGKEAGFNAPQDNRALIVGRVKSIQRKATFHSLVSSWHTPPTSTPRRRGDQKTPFVFPPSAALAAFLNKPSSLLCAAFLIEAAGLTPRAEFNGREGFNKNLAMRDLLKYCKRRGLLIELGGEAILVIRSERGLARKLAPFKSHSLLIRICYARYADDLLLGIVGAVFLLIEIQKRITHFLQSGLNLWVGSAESTTIAARSTVEFLGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLRSAIHSKFRDLGYSIPIKELTKGMSGRGRLLDAVQLAETLGKNGLKSPQVSVLWGTVKHIRQRSRGIPLLHSSGQSKVPSGVQQAVSRSGMSVLKTKLYTPFGRKAAGEGRGHWAGSFSSEFPIQIEAPIKKILRRLRDRGLISRRRPRPIHVASLTNVSDRDIVNWSAGIAISPLSYYRCCDNLYQVRTIVNYQIRWSAIFTLAHKHKSSARNIIPKYPKDSNIVNQEGGKTLAEFPNSIELGKLGLGQDPNNDGALNYMFNK</aaseq>|
 
AA = <aaseq>RKKEGSKFRPLTVVPPIEKIMKEAIRMVPESIYDPEFPDTSHFRSGRGCHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRFISILKEEIDDSKFFYPTQKQFSAGRLVGGEKGPDSVPNSVLLSALLGNIYLHKLDQEIGRIRQKHEIPLVVKIRSVLLRIGRRIDDQEKYGKEAGFNAPQDNRALIVGRVKSIQRKATFHSLVSSWHTPPTSTPRRRGDQKTPFVFPPSAALAAFLNKPSSLLCAAFLIEAAGLTPRAEFNGREGFNKNLAMRDLLKYCKRRGLLIELGGEAILVIRSERGLARKLAPFKSHSLLIRICYARYADDLLLGIVGAVFLLIEIQKRITHFLQSGLNLWVGSAESTTIAARSTVEFLGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLRSAIHSKFRDLGYSIPIKELTKGMSGRGRLLDAVQLAETLGKNGLKSPQVSVLWGTVKHIRQRSRGIPLLHSSGQSKVPSGVQQAVSRSGMSVLKTKLYTPFGRKAAGEGRGHWAGSFSSEFPIQIEAPIKKILRRLRDRGLISRRRPRPIHVASLTNVSDRDIVNWSAGIAISPLSYYRCCDNLYQVRTIVNYQIRWSAIFTLAHKHKSSARNIIPKYPKDSNIVNQEGGKTLAEFPNSIELGKLGLGQDPNNDGALNYMFNK</aaseq>|
 
DNA = <dnaseqindica>1..2037#agaaagaaagaagggtcgaagtttagaccgctcacagtagttccacccatagaaaagatcatgaaagaggcgatcagaatggtacccgaatccatttacgatcccgagtttccagacacatcgcacttccgctcgggtcgaggctgccactcggccctcagacggatcaaagaagagtggggaacctctcgctggtttttggaattcgacatcaggaagtgttttcacaccatcgaccgacatcgattcatctcaatcttgaaggaagagatcgacgattccaagttcttttaccccactcagaaacagttttccgccggacgactcgtaggaggtgagaagggccctgactccgtcccaaacagtgtactactatcggccctactaggcaatatctacctacacaagctcgatcaggagatagggaggatccggcagaagcacgaaattcctcttgtagtgaaaatcagatcggttctattaagaataggtcgtcgtattgatgaccaagaaaagtatggaaaagaagcaggcttcaacgctccccaagacaacagagccctcatagtggggagggtaaagagcatccaacgcaaagcaacctttcattcccttgtttcgtcgtggcacaccccccccacaagcacccccaggcgaaggggagaccagaaaacgccttttgttttccccccttcagcggccctagccgccttccttaacaagccctcgagcctcctttgcgccgccttcctcatagaagccgctgggttgaccccgagggccgaattcaatggtagagaaggctttaataagaatttggccatgagagaccttcttaagtattgcaaaagaaggggcctgctgatagagctgggcggggaggcgatactagttatcaggtcagagagaggcctggcccgtaagctggccccctttaaaagccattccttattaataaggatttgttacgcgcgatatgccgacgacttactactgggaatcgtgggtgccgtatttcttctcatagaaatacaaaaacgtatcacccacttcctacaatccggcctgaacctttgggtgggctccgcagaatcaacaaccatagctgcacggagtacggtagaattcctcggtacggtcattcgggaagtccccccgaggacgactcccatacaattcttgcgagagctggagaagcgtctacgggtaaagcaccgtatccatataactgcctgccacctacgctccgccatccattccaagtttagggacctaggttatagtatccctatcaaagagctgacgaaggggatgagcggaagaggtcgtctactggacgcggttcaactagcggagactcttggaaaaaatggactaaaaagtccccaagttagcgtattatgggggaccgtcaagcacatccggcaaagatcaagggggatcccgttgttgcatagctcaggtcagagcaaggtgccatcaggcgttcaacaggcagtctcacgatcgggcatgagtgtcctgaagacaaaattgtatactccctttggtcggaaggcggcgggggaaggaagggggcactgggcgggatctttcagcagcgaattccccatacagatagaggcgcctatcaaaaagatactccgaaggcttcgggatcgaggtctcattagccgaagaagacccaggccaatccacgtggcctctttgaccaacgtcagcgacagagacatagtaaattggtccgcgggcatcgcgataagtcctctgtcctactacaggtgctgcgacaacctttaccaagtccgtaccattgtcaactaccagatccgctggtccgctatattcaccctagcccacaagcacaaatcttcggcgcggaatataatcccaaagtaccccaaagactcaaatatagtcaatcaagaaggtggtaagacccttgcggagttcccaaacagcatagagcttgggaagcttgggctcggtcaagatccgaacaacgacggagcactcaactacatgtttaataagtag</dnaseqindica>|
 
DNA = <dnaseqindica>1..2037#agaaagaaagaagggtcgaagtttagaccgctcacagtagttccacccatagaaaagatcatgaaagaggcgatcagaatggtacccgaatccatttacgatcccgagtttccagacacatcgcacttccgctcgggtcgaggctgccactcggccctcagacggatcaaagaagagtggggaacctctcgctggtttttggaattcgacatcaggaagtgttttcacaccatcgaccgacatcgattcatctcaatcttgaaggaagagatcgacgattccaagttcttttaccccactcagaaacagttttccgccggacgactcgtaggaggtgagaagggccctgactccgtcccaaacagtgtactactatcggccctactaggcaatatctacctacacaagctcgatcaggagatagggaggatccggcagaagcacgaaattcctcttgtagtgaaaatcagatcggttctattaagaataggtcgtcgtattgatgaccaagaaaagtatggaaaagaagcaggcttcaacgctccccaagacaacagagccctcatagtggggagggtaaagagcatccaacgcaaagcaacctttcattcccttgtttcgtcgtggcacaccccccccacaagcacccccaggcgaaggggagaccagaaaacgccttttgttttccccccttcagcggccctagccgccttccttaacaagccctcgagcctcctttgcgccgccttcctcatagaagccgctgggttgaccccgagggccgaattcaatggtagagaaggctttaataagaatttggccatgagagaccttcttaagtattgcaaaagaaggggcctgctgatagagctgggcggggaggcgatactagttatcaggtcagagagaggcctggcccgtaagctggccccctttaaaagccattccttattaataaggatttgttacgcgcgatatgccgacgacttactactgggaatcgtgggtgccgtatttcttctcatagaaatacaaaaacgtatcacccacttcctacaatccggcctgaacctttgggtgggctccgcagaatcaacaaccatagctgcacggagtacggtagaattcctcggtacggtcattcgggaagtccccccgaggacgactcccatacaattcttgcgagagctggagaagcgtctacgggtaaagcaccgtatccatataactgcctgccacctacgctccgccatccattccaagtttagggacctaggttatagtatccctatcaaagagctgacgaaggggatgagcggaagaggtcgtctactggacgcggttcaactagcggagactcttggaaaaaatggactaaaaagtccccaagttagcgtattatgggggaccgtcaagcacatccggcaaagatcaagggggatcccgttgttgcatagctcaggtcagagcaaggtgccatcaggcgttcaacaggcagtctcacgatcgggcatgagtgtcctgaagacaaaattgtatactccctttggtcggaaggcggcgggggaaggaagggggcactgggcgggatctttcagcagcgaattccccatacagatagaggcgcctatcaaaaagatactccgaaggcttcgggatcgaggtctcattagccgaagaagacccaggccaatccacgtggcctctttgaccaacgtcagcgacagagacatagtaaattggtccgcgggcatcgcgataagtcctctgtcctactacaggtgctgcgacaacctttaccaagtccgtaccattgtcaactaccagatccgctggtccgctatattcaccctagcccacaagcacaaatcttcggcgcggaatataatcccaaagtaccccaaagactcaaatatagtcaatcaagaaggtggtaagacccttgcggagttcccaaacagcatagagcttgggaagcttgggctcggtcaagatccgaacaacgacggagcactcaactacatgtttaataagtag</dnaseqindica>|
 +
Link = [http://www.ncbi.nlm.nih.gov/gene?term=6450171 NCBI Gene:mat-r]
 
}}
 
}}
 
[[Category:Genes]]
 
[[Category:Genes]]

Revision as of 14:21, 27 October 2012

Gene Name

mat-r

Description

maturase-related protein

Version

GeneID:6450171

Length

2037 bp

Definition

Oryza sativa Japonica Group mat-r, Mitochondrion gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Mitochondrion

Location

Mitochondrion:315812..317848

Sequence Coding Region

315812..317848

Genome Context

<gbrowseImage1> name=NC_011033:315812..317848 source=Rice_Japonica_Mitochondrion preset=GeneLocation </gbrowseImage1>

Gene Structure
(RNA Editing)

<gbrowseImage2> name=NC_011033:315812..317848 source=Rice_Japonica_Mitochondrion preset=GeneLocation </gbrowseImage2>

Protein Sequence

<aaseq>RKKEGSKFRPLTVVPPIEKIMKEAIRMVPESIYDPEFPDTSHFRSGRGCHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRFISILKEEIDDSKFFYPTQKQFSAGRLVGGEKGPDSVPNSVLLSALLGNIYLHKLDQEIGRIRQKHEIPLVVKIRSVLLRIGRRIDDQEKYGKEAGFNAPQDNRALIVGRVKSIQRKATFHSLVSSWHTPPTSTPRRRGDQKTPFVFPPSAALAAFLNKPSSLLCAAFLIEAAGLTPRAEFNGREGFNKNLAMRDLLKYCKRRGLLIELGGEAILVIRSERGLARKLAPFKSHSLLIRICYARYADDLLLGIVGAVFLLIEIQKRITHFLQSGLNLWVGSAESTTIAARSTVEFLGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLRSAIHSKFRDLGYSIPIKELTKGMSGRGRLLDAVQLAETLGKNGLKSPQVSVLWGTVKHIRQRSRGIPLLHSSGQSKVPSGVQQAVSRSGMSVLKTKLYTPFGRKAAGEGRGHWAGSFSSEFPIQIEAPIKKILRRLRDRGLISRRRPRPIHVASLTNVSDRDIVNWSAGIAISPLSYYRCCDNLYQVRTIVNYQIRWSAIFTLAHKHKSSARNIIPKYPKDSNIVNQEGGKTLAEFPNSIELGKLGLGQDPNNDGALNYMFNK</aaseq>

Gene Sequence

<dnaseqindica>1..2037#agaaagaaagaagggtcgaagtttagaccgctcacagtagttccacccatagaaaagatcatgaaagaggcgatcagaatggtacccgaatccatttacgatcccgagtttccagacacatcgcacttccgctcgggtcgaggctgccactcggccctcagacggatcaaagaagagtggggaacctctcgctggtttttggaattcgacatcaggaagtgttttcacaccatcgaccgacatcgattcatctcaatcttgaaggaagagatcgacgattccaagttcttttaccccactcagaaacagttttccgccggacgactcgtaggaggtgagaagggccctgactccgtcccaaacagtgtactactatcggccctactaggcaatatctacctacacaagctcgatcaggagatagggaggatccggcagaagcacgaaattcctcttgtagtgaaaatcagatcggttctattaagaataggtcgtcgtattgatgaccaagaaaagtatggaaaagaagcaggcttcaacgctccccaagacaacagagccctcatagtggggagggtaaagagcatccaacgcaaagcaacctttcattcccttgtttcgtcgtggcacaccccccccacaagcacccccaggcgaaggggagaccagaaaacgccttttgttttccccccttcagcggccctagccgccttccttaacaagccctcgagcctcctttgcgccgccttcctcatagaagccgctgggttgaccccgagggccgaattcaatggtagagaaggctttaataagaatttggccatgagagaccttcttaagtattgcaaaagaaggggcctgctgatagagctgggcggggaggcgatactagttatcaggtcagagagaggcctggcccgtaagctggccccctttaaaagccattccttattaataaggatttgttacgcgcgatatgccgacgacttactactgggaatcgtgggtgccgtatttcttctcatagaaatacaaaaacgtatcacccacttcctacaatccggcctgaacctttgggtgggctccgcagaatcaacaaccatagctgcacggagtacggtagaattcctcggtacggtcattcgggaagtccccccgaggacgactcccatacaattcttgcgagagctggagaagcgtctacgggtaaagcaccgtatccatataactgcctgccacctacgctccgccatccattccaagtttagggacctaggttatagtatccctatcaaagagctgacgaaggggatgagcggaagaggtcgtctactggacgcggttcaactagcggagactcttggaaaaaatggactaaaaagtccccaagttagcgtattatgggggaccgtcaagcacatccggcaaagatcaagggggatcccgttgttgcatagctcaggtcagagcaaggtgccatcaggcgttcaacaggcagtctcacgatcgggcatgagtgtcctgaagacaaaattgtatactccctttggtcggaaggcggcgggggaaggaagggggcactgggcgggatctttcagcagcgaattccccatacagatagaggcgcctatcaaaaagatactccgaaggcttcgggatcgaggtctcattagccgaagaagacccaggccaatccacgtggcctctttgaccaacgtcagcgacagagacatagtaaattggtccgcgggcatcgcgataagtcctctgtcctactacaggtgctgcgacaacctttaccaagtccgtaccattgtcaactaccagatccgctggtccgctatattcaccctagcccacaagcacaaatcttcggcgcggaatataatcccaaagtaccccaaagactcaaatatagtcaatcaagaaggtggtaagacccttgcggagttcccaaacagcatagagcttgggaagcttgggctcggtcaagatccgaacaacgacggagcactcaactacatgtttaataagtag</dnaseqindica>

External Link(s)

NCBI Gene:mat-r