BGIOSGA017414

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Revision as of 04:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017414| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017414, complete gene.| tag = OS04G06...")
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Gene Name

BGIOSGA017414

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017414, complete gene.

LocusTag

OS04G0691900

Ensembl Transcript ID

BGIOSGA017414-TA

Ensembl Protein ID

BGIOSGA017414-PA

Length

5095

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34596056..34601150

Sequence Coding Region

34596056..34597030,34597115..34597951,34598056..34598390,34598760..34598886,34598983..34599141
,34599261..34600442,34600553..34600813,34600902..34601150

Genome Context

<gbrowseImage1> name=IndicaChromosome04:34596056..34601150 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:34596056..34601150 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATCAGTTACCCGCCGGAGGATGGCCGGTACTACTGTTCTTCCGTTGCCGCCGGCGATGATTCACCTGCGGCCCATCATACTAACGCCCACGACGACTGGGACTGGGACTGGGTACCCCCACCCCCTGCTGATGCTGCTGCTGCTGCTGCGGCGGACGACGACGACGACGATGGCGATCCGACTCCTGCTGGTAGTCCTGGCAGCAGGGGCGAAGACGAGGAGGAGGAGCGGCAGAGGGCGCAGATGGTGAGCGCCATGAACGGGCAGCTGAACATGCTGGCCAGCCGGTTCCTGGCATCGGCGGGCGTGGAGGAGGAGTGGCTGGAGGTGGTGACGGCGCTGTCCTGGGAGGCGGCGCTGCTGATCCAGACCCACGCCTGCACCGCCGGCAACGACATGGACCCGGCCTCCCACGTGAAGATCAAGTGCGTGGCGTCCGGAAGGCGGCGGCAAAGCCAGGTGGTGCGGGGGCTGGTGTTCCGCAAGAACGCGGCGCACAAGCACATGCCCACCAAGTGCCACCGCCCCACCCTCCTCCTCCTCCACGGCGCCCTCGGCCTCGACTCCCATCTCGGCTTCTCCTCCTTCGACTCCATGGAGCAGGACAAGCTCATTCTCCGAGCCTCCATCTCCCACATCATCCACACCTGCAGCCCCAACGTCGTCATGGTCGAGAAGACCGTCTCCCGCGACATTCAGGAGCTCCTCCTGCACCACGGCGTCACTCTGCTGCTCGACATGAAGCTCCACCGCTTGCAGAGAATCGCTCGCTGTTCCGGTGCTCCCTTGCTCTCCTTCTCCCAGCTTCTCCATGATTGCCCCAACCACCTCAAGCACTGCGACTACTTCCACATCGACAAGTTCTTCGAGGACCATAACACCACCACCACTACTAGTGCTGCTGCCCTGAACAAGCCATCTAAAACATTGATGTTCTTGGAAGGCTTTTCCAACCCATTGGGATGCACCATACTGCTCAGAGGCGCAAGCACCCAAGAACTGAAGAAAATCAAGCAAGTCTTGCACTACACAATATTCGCTGCATACCATCTGGTTGTTGAGACATCCTTCTTTGAAGATCAGAGGGTATTCTTGAATGATACAAATGTTGACGGGACACCACAAATCACTCATCAGACTTCCATTGTCTCAAATCGTTCACTTCCTACTGATTATGATGTCACTTGTACTAGCAGGGGATCATTACTGGAATACCATGATGGGGATCACAAGGCTACAGTTCCTTTCACAAATAAACCAGACTCGTACACACAAGATGAGGGTACAGCCATCCACTGTGAAGCACCTCCATCTGAAAACCTGCTGTCCTCAGTCTCCGGATCACTCAGAAGATTCATTGATATATTCCGTTATCAGAATATTTATTTACCTGTAACTTCTTCTCAAGATACAACTGGTCATCAGAATGAACAAGATACTGAAACCAGCCAAGAAACGGCGTCTGATACCTTAACAAAGGATCATTCTTGTGAGTATATGGATCAGTTAAGTGATCTCCAGGAACAAGTATTCGCCAAAACCAACGAAAAAATGTCACAGCCTGATCCTTTCGGTACTGAAAAACATCAGCAGAATGTGGAACAGTACAGGGCCGGCGAAAATATAAATTCAGACACAGATGATGCTGATGATGTAATGGATTCTCAGAGCATACTCATCTTGTTATCCAGCCAATGTGTTACGAAGCAGGTTGTCTGTGAGGAGAGCCATCTATACCGCATAAACTATTATGGGAATTTCGATGTCTCCTTAGGACGATATTTGCAAGACATTTTGCAGAATCAGAACCTAAGCTGTTCCTCATGTGGAGAGCCTCCAGATGCTCACATGTACTCTTACACCCACCGCAATGGAAATCTAACTATTAATGTGAGGCGTTTGCTGCCTCAGCATCATTTGCCTGGTGAATCTGAAGGAAAAATTTGGATGTGGACTAGATGTCTAAGATGTGAGCATGAGAGAGGGATATCCAAATCATCTCGGAGAGTGCTAATATCAACTGAAGCGCGTAATCTCTCCTTTGGCAAGTTCCTTGAACTCAGTTTCTCAAGCCACTCTGCTGCTAGAAGGCTATCAGTTTGTGGGCATTTGGTCAACAGGGACTGCTTGCGATTTTTTGGGTTGGGTTCCAAAGTTGCAAAGTTCCAATATTCATCAGTTGAAATTTACACTGCCTGCAAACCGCAACGAACCCTTGAGTTTCACAATCCCGATATGCGTGAGTGGTTCGAGCAAGAGGGAAGAAATGTTCTTGCGAGAGGAGTTAAGCTTTTCTCTGAAGTTTCTAGCTTAATACAGCACATGAAGATTTTCTCTGAGGTGGCAATTAACTGTGGAGACTCTCTTCCTGTCAAAGAAGTTTCCCAACTTGAAGAGATGCTAATTGAAGAAAAAGCTCAGTTTGTGGATTCTCTGGTGAAGGCTGTTGATGAAAGCGGGATGTCTAGCTCCTCTGTGAATGAGATTCTTGGTGTAAATTGTCTCTACCAGGATCTTCTGATTCTACTGTACGTGTGGGACCATCGTTTCCATCAAATTGTTGAGTGTAAGTCTGGAAGAATGGCTAATTGTGTCGGCAAGAAGGAAGCTGCTGAATTTGCCGGTGAACCAGCTGCAACTGGTGAAAGTGCAGTGCCCTTTGAGAATGGATATATCAAGGAAATGCAGTACAGCAGCGAAACCTTAACTGATGAAAATTCACGGCGTGAGGAGCAACATATCACAAAAGTGCCTTCTTTCAGAGTCTTGGAAGGTACAGATACGCAGTTGATAAATCCTGAATGTGGGGATAACAGGGAAACATGGATTTGGAGTCCATTGCACGAGTTAAGAGAGAGTTACAGGCATGAACTGCAGGCCGGGTATTTGGAAAGATTCGAACTTGTCAACAACTATTCTCCATCTCATCTATCCCCCCTGCACAAACAATCATCTGCTGAGTTCATAGTTGGTCCAGGTGGCAATGTGTTGTGCATATCAGAGGATGAAATATCCAGCATAATATCCCGCGCACTGGCCATATCGGAGGAACGTCGCCATCTTTTACTAGATGCTCTCATGGTTGAAGGTGAGGCAGCCTACAGCAGGGGGAGTGAGAGCTCTAAGATGGAGAAATCTTACAGCTCATTATCTGAAGCTTCTTCGGCCTCTTCGTCGTGGTCATCTATTGGATCTTCAGACTCAGATGCAAGCTTTTCATCTGACGACCTCTTCTCCAGCTATGATAGCTCACTTCTGTCATCCTTACTTCATCCTGAAGTATCTATCAATGGGAAATCATCTCTCAAAGGGAAATACTCGGTTATTTGTGTACATGCCAATCAGTTTTACACCCTTCGGAAGAAATGCTGCCCATCTGAGCTTGCATATATCACTTCCTTGAGCCGGTGCATGAAGTGGGATGCTCAAGGTGGAAAAAGTAAGGCTTTCTTTGCAAAAACATTGGATGACAGGTTCATCATCAAGCAAATAAAGAAGACAGAGTTTGAATCCTTCATAGAATTCGCACCCGATTACTTTAAGCATGTGTATCATTCTCTCGACACTGGGAGCCAAACTTGTCTTGCCAAAATTTTAGGAATCTATCAGGTTAAGCAAATCAGACATGGCAAGGAAGTGAAGCTTGATCTGATGGTGATGGAAAATCTTCTCTTCGGACACAAATTGTCAAGGATATATGATCTCAAAGGTGTTGTTTTCTCCAGACATGTCTCTGATTCGAATGACCATGGAACTGTTTACTTGGATCAAAACTTTGTCGATGATATGCGTGTTTCCCCTATATATGTTGGTGGAAGAACGAAACATCTCTTGCAGCGGGCAATCTGGAACGACACAGCTTTTCTCACTTCAATTAATGTTATGGACTACTCGTTACTGGTGGGAGTGGACAAAGAAAAGCATGAGTTTGTATTTGGCATCATAGATTACCTAAGGCAGTATACATGGGACAAGCAACTGGAGACGTGGGTGAAAACTTCTTTGGTAGTGCCAAAGAATGCTTCACCAACAGTAATCTCACCCAAAGAGTACAAGAAGAGGTTTAGGAAGTTCATGGCCAAGTATTTCCTGACAGTTCCAGACGATTGGAGTACATAG</cdnaseq>

Protein Sequence

<aaseq>MAISYPPEDGRYYCSSVAAGDDSPAAHHTNAHDDWDWDWVPPPPADAAAAAAADDDDDDGDPTPAGSPGSRGEDEEEERQRAQMVSAMNGQLNMLASRFLASAGVEEEWLEVVTALSWEAALLIQTHACTAGNDMDPASHVKIKCVASGRRRQSQVVRGLVFRKNAAHKHMPTKCHRPTLLLLHGALGLDSHLGFSSFDSMEQDKLILRASISHIIHTCSPNVVMVEKTVSRDIQELLLHHGVTLLLDMKLHRLQRIARCSGAPLLSFSQLLHDCPNHLKHCDYFHIDKFFEDHNTTTTTSAAALNKPSKTLMFLEGFSNPLGCTILLRGASTQELKKIKQVLHYTIFAAYHLVVETSFFEDQRVFLNDTNVDGTPQITHQTSIVSNRSLPTDYDVTCTSRGSLLEYHDGDHKATVPFTNKPDSYTQDEGTAIHCEAPPSENLLSSVSGSLRRFIDIFRYQNIYLPVTSSQDTTGHQNEQDTETSQETASDTLTKDHSCEYMDQLSDLQEQVFAKTNEKMSQPDPFGTEKHQQNVEQYRAGENINSDTDDADDVMDSQSILILLSSQCVTKQVVCEESHLYRINYYGNFDVSLGRYLQDILQNQNLSCSSCGEPPDAHMYSYTHRNGNLTINVRRLLPQHHLPGESEGKIWMWTRCLRCEHERGISKSSRRVLISTEARNLSFGKFLELSFSSHSAARRLSVCGHLVNRDCLRFFGLGSKVAKFQYSSVEIYTACKPQRTLEFHNPDMREWFEQEGRNVLARGVKLFSEVSSLIQHMKIFSEVAINCGDSLPVKEVSQLEEMLIEEKAQFVDSLVKAVDESGMSSSSVNEILGVNCLYQDLLILLYVWDHRFHQIVECKSGRMANCVGKKEAAEFAGEPAATGESAVPFENGYIKEMQYSSETLTDENSRREEQHITKVPSFRVLEGTDTQLINPECGDNRETWIWSPLHELRESYRHELQAGYLERFELVNNYSPSHLSPLHKQSSAEFIVGPGGNVLCISEDEISSIISRALAISEERRHLLLDALMVEGEAAYSRGSESSKMEKSYSSLSEASSASSSWSSIGSSDSDASFSSDDLFSSYDSSLLSSLLHPEVSINGKSSLKGKYSVICVHANQFYTLRKKCCPSELAYITSLSRCMKWDAQGGKSKAFFAKTLDDRFIIKQIKKTEFESFIEFAPDYFKHVYHSLDTGSQTCLAKILGIYQVKQIRHGKEVKLDLMVMENLLFGHKLSRIYDLKGVVFSRHVSDSNDHGTVYLDQNFVDDMRVSPIYVGGRTKHLLQRAIWNDTAFLTSINVMDYSLLVGVDKEKHEFVFGIIDYLRQYTWDKQLETWVKTSLVVPKNASPTVISPKEYKKRFRKFMAKYFLTVPDDWST</aaseq>

Gene Sequence

<dnaseqindica>1..975#1060..1896#2001..2335#2705..2831#2928..3086#3206..4387#4498..4758#4847..5095#ATGGCGATCAGTTACCCGCCGGAGGATGGCCGGTACTACTGTTCTTCCGTTGCCGCCGGCGATGATTCACCTGCGGCCCATCATACTAACGCCCACGACGACTGGGACTGGGACTGGGTACCCCCACCCCCTGCTGATGCTGCTGCTGCTGCTGCGGCGGACGACGACGACGACGATGGCGATCCGACTCCTGCTGGTAGTCCTGGCAGCAGGGGCGAAGACGAGGAGGAGGAGCGGCAGAGGGCGCAGATGGTGAGCGCCATGAACGGGCAGCTGAACATGCTGGCCAGCCGGTTCCTGGCATCGGCGGGCGTGGAGGAGGAGTGGCTGGAGGTGGTGACGGCGCTGTCCTGGGAGGCGGCGCTGCTGATCCAGACCCACGCCTGCACCGCCGGCAACGACATGGACCCGGCCTCCCACGTGAAGATCAAGTGCGTGGCGTCCGGAAGGCGGCGGCAAAGCCAGGTGGTGCGGGGGCTGGTGTTCCGCAAGAACGCGGCGCACAAGCACATGCCCACCAAGTGCCACCGCCCCACCCTCCTCCTCCTCCACGGCGCCCTCGGCCTCGACTCCCATCTCGGCTTCTCCTCCTTCGACTCCATGGAGCAGGACAAGCTCATTCTCCGAGCCTCCATCTCCCACATCATCCACACCTGCAGCCCCAACGTCGTCATGGTCGAGAAGACCGTCTCCCGCGACATTCAGGAGCTCCTCCTGCACCACGGCGTCACTCTGCTGCTCGACATGAAGCTCCACCGCTTGCAGAGAATCGCTCGCTGTTCCGGTGCTCCCTTGCTCTCCTTCTCCCAGCTTCTCCATGATTGCCCCAACCACCTCAAGCACTGCGACTACTTCCACATCGACAAGTTCTTCGAGGACCATAACACCACCACCACTACTAGTGCTGCTGCCCTGAACAAGCCATCTAAAACATTGATGTTCTTGGAAGGCTTTTCCAACCCATTGGGATGCACCGTAAGCACTCGATCAAATACTCCATTTCATTCAATTACCTAGATCAATTACTCTGCATTATTCTCACTACGCGCGCGCATGCAGATACTGCTCAGAGGCGCAAGCACCCAAGAACTGAAGAAAATCAAGCAAGTCTTGCACTACACAATATTCGCTGCATACCATCTGGTTGTTGAGACATCCTTCTTTGAAGATCAGAGGGTATTCTTGAATGATACAAATGTTGACGGGACACCACAAATCACTCATCAGACTTCCATTGTCTCAAATCGTTCACTTCCTACTGATTATGATGTCACTTGTACTAGCAGGGGATCATTACTGGAATACCATGATGGGGATCACAAGGCTACAGTTCCTTTCACAAATAAACCAGACTCGTACACACAAGATGAGGGTACAGCCATCCACTGTGAAGCACCTCCATCTGAAAACCTGCTGTCCTCAGTCTCCGGATCACTCAGAAGATTCATTGATATATTCCGTTATCAGAATATTTATTTACCTGTAACTTCTTCTCAAGATACAACTGGTCATCAGAATGAACAAGATACTGAAACCAGCCAAGAAACGGCGTCTGATACCTTAACAAAGGATCATTCTTGTGAGTATATGGATCAGTTAAGTGATCTCCAGGAACAAGTATTCGCCAAAACCAACGAAAAAATGTCACAGCCTGATCCTTTCGGTACTGAAAAACATCAGCAGAATGTGGAACAGTACAGGGCCGGCGAAAATATAAATTCAGACACAGATGATGCTGATGATGTAATGGATTCTCAGAGCATACTCATCTTGTTATCCAGCCAATGTGTTACGAAGCAGGTTGTCTGTGAGGAGAGCCATCTATACCGCATAAACTATTATGGGAATTTCGATGTCTCCTTAGGACGATATTTGCAAGACATTTTGCAGAATCAGGTACCTATCTATTTTTTTAGGAATAATTTCGATAACACATGACATAGTAGGTCAATTGTATATCTACTAGTCAGGATGTGATGTTTTTTACTGAACTGTGGCAGAACCTAAGCTGTTCCTCATGTGGAGAGCCTCCAGATGCTCACATGTACTCTTACACCCACCGCAATGGAAATCTAACTATTAATGTGAGGCGTTTGCTGCCTCAGCATCATTTGCCTGGTGAATCTGAAGGAAAAATTTGGATGTGGACTAGATGTCTAAGATGTGAGCATGAGAGAGGGATATCCAAATCATCTCGGAGAGTGCTAATATCAACTGAAGCGCGTAATCTCTCCTTTGGCAAGTTCCTTGAACTCAGTTTCTCAAGCCACTCTGCTGCTAGAAGGCTATCAGTTTGTGGGCATTTGGTCAACAGGGACTGCTTGCGATTTTTTGGGTATGTATTCTCATTTCTCAAGAACTATTTTGAACATGTCGTGTAAAAGTTCTCTCTATATAATACTCCCTCCGTATTTTAATGTATAACACCGTTGACTTTTCGACCAACGTTTGACCATTCGTTTTATTTAAAATTTTCGTGCAAATATGAAAGTATTTATATCATGCTTAAAGAACATTTGATGATGAATCGAGTCATAATAAAATAAATGATAATTGTATAAATTTTTTGAATAAGATGAATGGTCAAACGTTGGATAAAAAATCAACGGCGTCATACATTAAAATATGGAGGTAGTACATACTAAGCATCCTTTCGCCCTTCTTTATTTCTTTCTTCTTTTGTTGGAAAAAATGGTGACTTCAGGTTGGGTTCCAAAGTTGCAAAGTTCCAATATTCATCAGTTGAAATTTACACTGCCTGCAAACCGCAACGAACCCTTGAGTTTCACAATCCCGATATGCGTGAGTGGTTCGAGCAAGAGGGAAGAAATGTATGTACTATTTTATTTATCGGTTTCATCACATGATTTATCTTGTGAACATTCATAGGTCAGATTGGGCCTAATGCTTGTGTTGCACTTTTTAAGGTTCTTGCGAGAGGAGTTAAGCTTTTCTCTGAAGTTTCTAGCTTAATACAGCACATGAAGATTTTCTCTGAGGTGGCAATTAACTGTGGAGACTCTCTTCCTGTCAAAGAAGTTTCCCAACTTGAAGAGATGCTAATTGAAGAAAAAGCTCAGTTTGTGGTAAACCTTCTGGTCTTTTTTCTTCTCTTTACCTTGTGGTAACTGGTAAGCCTAGAGATAAGTGTGCATGCTAATCATCTCCGATAACTGTCAATTCCAATATGAATATCATCAAACAGGATTCTCTGGTGAAGGCTGTTGATGAAAGCGGGATGTCTAGCTCCTCTGTGAATGAGATTCTTGGTGTAAATTGTCTCTACCAGGATCTTCTGATTCTACTGTACGTGTGGGACCATCGTTTCCATCAAATTGTTGAGTGTAAGTCTGGAAGAATGGCTAATTGTGTCGGCAAGAAGGAAGCTGCTGAATTTGCCGGTGAACCAGCTGCAACTGGTGAAAGTGCAGTGCCCTTTGAGAATGGATATATCAAGGAAATGCAGTACAGCAGCGAAACCTTAACTGATGAAAATTCACGGCGTGAGGAGCAACATATCACAAAAGTGCCTTCTTTCAGAGTCTTGGAAGGTACAGATACGCAGTTGATAAATCCTGAATGTGGGGATAACAGGGAAACATGGATTTGGAGTCCATTGCACGAGTTAAGAGAGAGTTACAGGCATGAACTGCAGGCCGGGTATTTGGAAAGATTCGAACTTGTCAACAACTATTCTCCATCTCATCTATCCCCCCTGCACAAACAATCATCTGCTGAGTTCATAGTTGGTCCAGGTGGCAATGTGTTGTGCATATCAGAGGATGAAATATCCAGCATAATATCCCGCGCACTGGCCATATCGGAGGAACGTCGCCATCTTTTACTAGATGCTCTCATGGTTGAAGGTGAGGCAGCCTACAGCAGGGGGAGTGAGAGCTCTAAGATGGAGAAATCTTACAGCTCATTATCTGAAGCTTCTTCGGCCTCTTCGTCGTGGTCATCTATTGGATCTTCAGACTCAGATGCAAGCTTTTCATCTGACGACCTCTTCTCCAGCTATGATAGCTCACTTCTGTCATCCTTACTTCATCCTGAAGTATCTATCAATGGGAAATCATCTCTCAAAGGGAAATACTCGGTTATTTGTGTACATGCCAATCAGTTTTACACCCTTCGGAAGAAATGCTGCCCATCTGAGCTTGCATATATCACTTCCTTGAGCCGGTGCATGAAGTGGGATGCTCAAGGTGGAAAAAGTAAGGCTTTCTTTGCAAAAACATTGGATGACAGGTTCATCATCAAGCAAATAAAGAAGACAGAGTTTGAATCCTTCATAGAATTCGCACCCGATTACTTTAAGCATGTGTATCATTCTCTCGACACTGGGAGCCAAACTTGTCTTGCCAAAATTTTAGGAATCTATCAGGTAGGTGTACTTAATTTACATCAGACGTGCTATGGAATAATTTCATGATTTTTTTTCCCTCCTTGGTTGTTATACATCCTTTTAAGGACCGGGCTCACTATTTGTTTCAGGTTAAGCAAATCAGACATGGCAAGGAAGTGAAGCTTGATCTGATGGTGATGGAAAATCTTCTCTTCGGACACAAATTGTCAAGGATATATGATCTCAAAGGTGTTGTTTTCTCCAGACATGTCTCTGATTCGAATGACCATGGAACTGTTTACTTGGATCAAAACTTTGTCGATGATATGCGTGTTTCCCCTATATATGTTGGTGGAAGAACGAAACATCTCTTGCAGCGGGCAATCTGGAACGACACAGCTTTTCTCACTGTAAGTACTGATATTTCATTTCAACCACGTATAACCAATCATGTTCTCTCTTACAATATGAGCTGACAGAAATACTAAATTTTTGCAGTCAATTAATGTTATGGACTACTCGTTACTGGTGGGAGTGGACAAAGAAAAGCATGAGTTTGTATTTGGCATCATAGATTACCTAAGGCAGTATACATGGGACAAGCAACTGGAGACGTGGGTGAAAACTTCTTTGGTAGTGCCAAAGAATGCTTCACCAACAGTAATCTCACCCAAAGAGTACAAGAAGAGGTTTAGGAAGTTCATGGCCAAGTATTTCCTGACAGTTCCAGACGATTGGAGTACATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017414