BGIOSGA000074

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Revision as of 09:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000074| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000074, complete gene.| tag = P0401G1...")
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Gene Name

BGIOSGA000074

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000074, complete gene.

LocusTag

P0401G10.24

Ensembl Transcript ID

BGIOSGA000074-TA

Ensembl Protein ID

BGIOSGA000074-PA

Length

5949

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46398476..46404424

Sequence Coding Region

46404247..46404424,46403996..46404135,46403401..46403492,46403140..46403253,46402336..46402666
,46401567..46401746,46401340..46401420,46400857..46401075,46400632..46400774
,46399843..46400009,46399494..46399711,46399025..46399117,46398476..46398673

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46398476..46404424 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46398476..46404424 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCTCCGCCTCCGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTCCTCCCCTTCTCCCCCTTCAGGCGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCCGCCGCCGCCTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGGCTCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGGCAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTACAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTCATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCAACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAGATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGATGTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCACTTGTGAGAACACTACCGGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTTGAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTTATGACCAAGAAGTTTGAGGGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAGGGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTTGAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGGGAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAATGCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGGGAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACAAAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAAGAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGACAAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAA</cdnaseq>

Protein Sequence

<aaseq>MLLRLRPPPQPAASLASFLPFSPFRRFLHSPSWRPPPPPPPRRRRLLSTAVASSSSSSKGSTSLEERYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEVDALGGEMGKIADRCYLQKRVLNSSKGPAVRALRAQTDKREYAVEMKKVVESTQNLFIREAMATEVMIGQNDNVEGVRTFFGMDFYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGESASHGLTENLQQLGFETDRLKTGTPPRIDRRTVNFSGLEPQHGDEEVGWFSFDPEFHIERDQMCCYLTRTTKETHQIVRDNLDETPTYGGWVEAKGPRYCPAIEDKIVRFKDKESHQVFLEPEGRDVPELYLQGFSTGLPERLQLSLVRTLPGLENCVMLRPAYAVEYDYLPAYQCSRSLMTKKFEGLFFSGQINGTTGYEEAAAQGIISGINAARHSDGKPLIILERESSYIGTLIDDLVTKDLREPYRMLTSRSEHRLLLRADNADSRLTPLGRDIGLIDDRRWELYQSKQARIKEEKERLKSTKIPGGEFAAAVTSVSNQPVKESSTLEAILKKPHVQYKLLDKHGYGNEHLSRIEKECVEIDIKYEGFIARQQSQLQQIVNQEHKKLPEDLDYHSMTNLSLEAREKLSKVRPQTIGQASRIGGVSPADMTVLLIWMESNRRMANYKRQQSTLRSAATKADDSSDEVVHASATNA</aaseq>

Gene Sequence

<dnaseqindica>1..178#290..429#933..1024#1172..1285#1759..2089#2679..2858#3005..3085#3350..3568#3651..3793#4416..4582#4714..4931#5308..5400#5752..5949#ATGCTGCTCCGCCTCCGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTCCTCCCCTTCTCCCCCTTCAGGCGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCCGCCGCCGCCTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGGTAACGCTGCTCACCTCGTAGTGGTCGATGGGGATCTGAGTATTTGCGACCACATGAAACAAGCGAAAACGATTCTAATTGATGGATGGGTTTCTGCTATTCTGGCATTAGGCTCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGGCAGGTCTAACACTGAGCTCCATTGCAATTTTTCACTTACTAGATTTCTTCATTTGTGTACTACCATATCCTTCCATTAGACCAAATTGTACTTTCTTTATGATTCCTGTATCTTGGTTACAAAAGCAAAGTTAGGTAGTAAAAGATCATATGCTAAAAATATGTGGTCATTGATTCCTTGTGGCATAGTTAGTTAAAATCTGCAATCATATACCCCATACAACATGAAGCAAGCAATTGAACCATGTTTCATAAGACTTGTATAAGTGCATGTCAAATCCACGGATTTTTCTTAGAAAATTATGATATGGCATGTATAGTGGATGAAATGCTTACATACATACATTTTTGGAACTCATAGTACAAGGATAGTTTCCAACGTGGTATGTCCTCAGTCTAGGCTATAAGGATCTTAGCAAATCAACCTTTTTAACAAAGGGAACATTGTGTTACTATTGTAATATGGCTACCTGTCCTAACTCTTCTTTTATTCCTTATGTTGCATAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTACATTTAATTGGTTCATTATTTTAGATAGATAGATTTTCTTTTCCCCTACTTTTTGGACTTTTAGTTGGTGTGTAGGTCTGAGAGATGAAACCTGCACCGAAATCCTCAAAGATCTATTGTCATACTGATTACTTCATCTCTTAGGTGCTACCTACAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGGTCAATATGCACTCTCGTCTTTTATCAGAATTTACAAACTATATTCGAATTTGTTTGCCTTTTAGGTAAATCAAAAGACACCAAACTACTCCCTCCTGATTTCTGAATAAGAGCGAGCGTGCTGTGTAAATTCTGAATTGGCTGGAGTTATTCACGCGTTTCAGATATTCTTAAGTTGTACATGGTTATCCACAGAGTCACAAGGCTTGTGTTTTATTAGTTTAACCTATGAAGACAACTTCATTCATTTGACATGTGTTTTGATTGGTCCTGACCAAAGACTATTGACTAGATGTTAATTCTAATTTCTTGAGTAGAGGTGAATCTGTTTCTGCATATCTTTTACCTATAAATTCAACAAATATAGTTGATGTGTTCTTGTGATATCTAGAAATATGTTGTTGTTGAATGCAGGTACTTTAGTGTAATATCTTTCATGTTATTTACTGATTATTGCATATGCTATTTTTCAGCACACAAAATCTTTTCATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTATGGAACATCTGACAATATGTATGAGTGAAGTTTTTTGTTATTCGTTATATACAAGTGTCATCTTCCACTTGTATCTGAAAATGCAAATTCCGTCATTCTTATATACTTTTGCTTCTCTCTTTCATTTGCCACTTTACATTTCATTGTTAAAGCAACGCCTTTTGTACTCTTATTAGTAAGATCTAGAAGCACTGTGCTTCTGTTGTGACAGTTAATTTGGTTTCTCTCTGATTAGAAGTCAAAATTTCAAAAGCACCCCTTGAATACAGTGTTCGTTTTATGTAATGATTGATCAAAGTTGTGAACCCTTGTGGATAATTGATTCTTTTGCTATCGATCTGGCACAGAAAATAGATTGAATGGACTTTGCACAATTTGAACCTTCTTGTTCAAATATTTCCAAATGTATGTGGTATTTTCTCCGATAGACTTTGAACAACATTTCCTGCACCTGTAGTATCTGCTGCATACTTTGTGCACTTAGTTGCGTTTATGAATCTATGACTTATCAGCTGCTTAAGTTTGCAGTTCAAGTTTGCTTTGACCATATATGTAAATGTTCAAAAGATGGTTTCTCTTTAAACAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCAACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAGGTATAATTCTACCATCTGAGTTTTTTAGTTTGTTAAATGGCAGATTATTCTATTTTAGTACGTGTAATCAAACTTATTATTGCTAAGGAAGAGGTTGTTCACGTTATGGCACAATCATGAGGATAACCAGACTATCTTTGCTTCAGATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGATGTTCCTGAGCTTTATCTGCAGGTCAATCTACATCCAGAACTCCCTCTATCCATTCAACATATTTTATATCATGGTTGTATTTATTAATCATCTATTATGGTTCTCTTGTCCCCTATTTTTTAAAAATAATGCCTTCTGCACTGTTTTGCACTCTCTAGTCATATTTATTAATCATCTATTGTGGTTCTCCAATATTCTATCCCCCATTTTATTGAAAATAATGTCTTCTGCACTGTTGTTTATCCCAATTCCGACCACTCAAGATCATTTGTACATCGTAAGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCACTTGTGAGAACACTACCGGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTTGAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTTATGACCAAGAAGTTTGAGGGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAGGTTAATTTATTTTCTTTGCTGTGTTTATATGGTTGTTCAACAAGTTTTTTTGAATCCTAAGCTTGCTTACTTTTGTTTACAGGGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTTGAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGGGAGCCTTATCGCATGTTAACAAGGTATGTTTTTTTTTCTGTACGAATGCTATTAGTATGATGGTTGTATTTTTCTTTTTTAGAAAATGCAGGAGAGGTGTGTTTCATTTCATTAAGAAGGAAAAAACAAACACCCATACAATCAGGGCTCACAAGCCCTCCACCCAAACACACCCACAAAAACATCACACAAGGTGACGCACGGCCAATGATGGTTGTATTAAGCTGAAGCAATTGGTGATATAACTGTGTATCCTAATTAGTACTAGATTATGTGTTACTCTGAGAAGCTAAGAGTCTGTGGGCGCCAATTTGCCATAGAATAATGGTCATAATTCTCATTAGATAATGTGTAATCAAATGAACTATTTAAATGGAGGGGCCAATGGTAACCTGATTAGAGATGTGTTGCAATAGGATGTTAATTTTTGATACTCTCTTCGGCTAACTATCAGAAACATGCTATGCTTTGTACATTGTGTAATCCATTAGAAACTAGAAACTTAACACATTACTAGTTCAATATGATCAGGGAAAAACAGTCAGCCGGTAAGTGGCTTTACCAGTAGGTACTGGTAGCATTATGATTTCTTGAATCATAACTTTGTTGACCTTTTTTTTTTTGTTGCTACATACATACATTCAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAATGCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGGGAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACAAAAATCCCAGGTAAATTCTATCTTTTTTGAAATGCTTCATGAATTCATGCCAAGTTTTAAAATGCTAGTACCAACATGCACTTGCTCAGTATAGTCACTAGCATGAATTCAGATGCTCTAACTCGGTATTTCCGTTCTCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAAGAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGACAAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGGTAATTTGCTTTGTGGATCATGTGCATTTGTCCTACTTCCTAAGATGCACTTATAAGGGAGGCTCTTTGAACTGAAAGAAAAAATGTGCATAAACATTTAAGATGTAATTCAATGCATATTGAGGAACTTGTTTAGCTCTTTGGTAGCTGTATTCTGTTGGGCTTCCCAAATTGGGAGCACTAGTTGATTATTTATCAGCTTTTGTGTAGCTGTGTTCTGTTGGGCCTCCTAACTTGAGAGATGTAGTTGATTATTTATATTCAGCAATGTAATATAGAATTCTGATGTTGTTTCATATTCCTTTGTTTAACACCTCTTGTTTTTTCTACCTAGAAGATATGCTGACCCCTCGTTTTATTTTTTTCTCTTCATCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTGTGTGATCTTCTTCATGTTAAGAACCTTATATAGCAGATGACCTGTCAACATATATAAATGAAATGCATTATACGGTTCTCTATTTGTTGACACACATGTTATCTACACCTCAGTCATCTGAGATAATTTGTTTTTAAAATGCTTTAGAATTCTCAATATATCAGCTGCTGAAGGTTCTGGTGATCATATCTTGCCTGAAATTGTGTCGTGCACACATTATCTAAGTTTTACAATTTGGCAACTGAATATCATTCATGATCTGTAAGAAATTCAAGCTGCTAGATTTGCATTTAATACAACTAATTTTTTTCACCGTGCAATGCAATTTATATTATGTGGTATGTTTAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000074